Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq313 100 3e-17 >seq313 Length=5067560 Score = 100 bits (110), Expect = 3e-17 Identities = 331/506 (65%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 9754 TGGTAATAGGACTAAAAGCTAAAGAGAGAGAATTAAAGATAGAAGGTAGAtttttttCAT 9813 |||||||||||||| | | |||| |||||| |||| ||| || |||||||| | Sbjct 3837901 TGGTAATAGGACTACGACCAAAAGCGAGAGAGCTAAAACTAGTCGGACGATTTTTTGCTC 3837842 Query 9814 TGATGTCATATGACATGAGGGATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATT 9873 | ||||| | | | || || ||||| || || || || |||| || ||| Sbjct 3837841 TCATGTCCTGGGCATTAAGAGAGTACTTTGTTATCACAGAGCTACTGATTAAGCGCCATT 3837782 Query 9874 ATGTACCATTATTCAAAGGATTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAA 9933 | | || || | |||||| |||| ||||| |||||| | ||||| || ||||| || | Sbjct 3837781 TTTTTCCCTTGTGCAAAGGTCTGACGATGGCAGATGATAACAATACTGTCGTAAATAAGA 3837722 Query 9934 TGCTCAAAGTTTCTAAAGGT-CAAGGGCTAACAGATTATAAAGAGATAACATTTGCTAAT 9992 |||| ||| || || | ||| || | || ||| | | | || ||||||| Sbjct 3837721 TGCTTCAAGCCTCGGAATATAAAAGCACTCATGGA-TATGATCAAGTTACCATTGCTAAA 3837663 Query 9993 CACTTGGATTATGAGAAGTGGAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTC 10052 || | ||||| || ||||| ||||| || |||| ||| | || | ||| || ||| Sbjct 3837662 CATGTCGATTACACTAAATGGAACAATTACCAGAGGAAAGAAGCTAATGATCCTGTTTTC 3837603 Query 10053 AGAGTAATGGGCCAGTTTTTAGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTT 10112 | ||||||||| | ||| | || | || | | | || || ||||||||| Sbjct 3837602 CGTGTAATGGGCAATTTTATGGGAATGGAGAACCTGTTTTGTCGTACCCATGAGTTCTTT 3837543 Query 10113 GAAAATAGTCTAATTTATTACAATGGCCGACCTGATTTAATGTATGTCAGAA-AT--AAA 10169 |||| | | ||||||| || | | ||| || | ||| || |||| || || Sbjct 3837542 GAAAGTTCCTTCTTTTATTATAAAGATCAGCCTAATCTGATG-ATAGTAGAAGATGGGAA 3837484 Query 10170 GTTGTACACTCCAAAGGTGATGACATCGTTTGCTGGGAAGGACAAAAAGGAGGATTAGAG 10229 | | || | || |||||| || | || || ||| |||| || ||| |||| ||| Sbjct 3837483 GAT-TA-AGAACAGAGGTGAAGATCTTGTGTGTTGGCAAGGTCAGGCAGGCGGATGCGAG 3837426 Query 10230 GGTCTAAGACAAAAAGGATGGAGTGT 10255 ||||| ||| ||||| |||||||| Sbjct 3837425 GGTCTTCAACAGAAAGGTTGGAGTGT 3837400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46687316575220