Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031268.1 Length=8683 Score E Sequences producing significant alignments: (Bits) Value seq313 109 3e-20 >seq313 Length=5067560 Score = 109 bits (120), Expect = 3e-20 Identities = 375/571 (66%), Gaps = 18/571 (3%) Strand=Plus/Minus Query 3691 GAGAGTTAAAAGACGTGGGAAGATTTTTCTCTCTGATGACCTGGGATCTGAGAGAGTATT 3750 ||||| ||||| || ||| ||||||| |||| ||| |||||| | |||||||| | Sbjct 3837874 GAGAGCTAAAACTAGTCGGACGATTTTTTGCTCTCATGTCCTGGGCATTAAGAGAGTACT 3837815 Query 3751 TTGTATCCACTGAGTACCTCATTAAGATGTATTATGTTCCCTTGTTTGAAGGACTCACCA 3810 |||| ||| ||| || |||||| ||| | ||||||||| |||| || || | Sbjct 3837814 TTGTTATCACAGAGCTACTGATTAAGCGCCATTTTTTTCCCTTGTGCAAAGGTCTGACGA 3837755 Query 3811 TGGCAGATGATCTAAAATCTGTAACACGAAAGATACTGGA-GTGTACCACTGGTCACGGT 3869 ||||||||||| || |||| | ||||| || | | | | | | | Sbjct 3837754 TGGCAGATGATAACAATACTGTCGTAAATAAGATGCTTCAAGCCTCGGAATATAAAAGCA 3837695 Query 3870 CAGATCGGTTACAAGGTAGTCAGCTTTGCTAATCACTTAGACTATGAGAAATGGAACAAT 3929 | || || || | ||| | | ||||||| || | || || |||||||||||| Sbjct 3837694 CTCAT-GGATATGATCAAGTTACCATTGCTAAACATGTCGATTACACTAAATGGAACAAT 3837636 Query 3930 CATCAGAGGAAA-AAGTCAACCTTCCCCGTCTTCAAGGTTATGGGTCAGTTCCTTGGGAT 3988 | ||||||||| ||| || | || || ||| || ||||| | || | || || Sbjct 3837635 TACCAGAGGAAAGAAGCTAATGAT-CCTGTTTTCCGTGTAATGGGCAATTTTATGGGAAT 3837577 Query 3989 GCCAAACCTATTCGCTCAAACTCATGATTTCTTCGAACAGAGT---TTTGTTTATTATGG 4045 | ||||| || || || ||||| ||||| ||| ||| || |||||||| Sbjct 3837576 GGAGAACCTGTTTTGTCGTACCCATGAGTTCTTTGAA---AGTTCCTTCTTTTATTATAA 3837520 Query 4046 TGAACGTCCTGATCTTATGACTGTTCAAGGAGGAAAGATCGTGAACAATACAGAACATAT 4105 || | ||| |||| |||| || ||| || ||||| ||||| ||| || | Sbjct 3837519 AGATCAGCCTAATCTGATGATAGTAGAAGATGGGAAGATTAAGAACAGAGGTGAAGATCT 3837460 Query 4106 TGTATGTTGGAACGGTCAACTGGGCGGACTTGAAGGACTACGACAAAAGGGATGGAGCGT 4165 ||| |||||| | ||||| |||||| || || || | ||| || || ||||| || Sbjct 3837459 TGTGTGTTGGCAAGGTCAGGCAGGCGGATGCGAGGGTCTTCAACAGAAAGGTTGGAGTGT 3837400 Query 4166 CCTCAATCTTCTCGTCATCCTACGAGAGTCGAAGATC-CGCAACACCCAAG--TCAGAGT 4222 |||||| || | | ||||| |||||||| ||| || || | |||| ||||| | Sbjct 3837399 TGTCAATCACCTTGCTCTACTACGTGAGTCGAA-ATCTCGAAATA--CAAGGATCAGA-T 3837344 Query 4223 GCTTGCT-CAAGGTGACAACCAAGTGATTTG 4252 |||| | || || ||||| ||||| || || Sbjct 3837343 ACTTGATGCAGGGGGACAATCAAGTTATCTG 3837313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27670005904328