Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031308.1 Length=2217 Score E Sequences producing significant alignments: (Bits) Value seq890 104 3e-19 >seq890 Length=127545 Score = 104 bits (114), Expect = 3e-19 Identities = 224/330 (68%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 783 CATGATGAGATTTAAGATTGATGCTGCATACATAAGGACAAGGTATCATCTTG-TGTATT 841 ||| |||| | |||| || || ||||| | || || ||| |||| || ||| |||||| Sbjct 89905 CATCATGAAACTTAAAATAGACTCTGCACAAATGAGAACACGGTA-CAGTTTGATGTATT 89963 Query 842 ACACAAGTGAGTATGAGATCAAAACTAGCT-ACACTTCAAACTGTAAAGGGTCTGGCAGT 900 |||| ||||| || | | || | || | ||| | || || ||| |||| Sbjct 89964 ACACCAGTGAATACACACTTGACAC-ATCTCATTATTCTAGATGCAAGGGGGCTGGGGAA 90022 Query 901 TGCTGGTCAGGCGGTTGCAGAGATATAGGAGTTCATCCCAGATTGAGAGCAATAGCCAAC 960 || ||| | || || || | ||| ||||| | ||||| | | | | |||||| Sbjct 90023 TGTTGGGCTGGTGGCTGTCGTGATGTAGGATTGCATCCTGCACTCCGCAACAGAGCCAAT 90082 Query 961 AGTAGCATAATGGGGTATGGGTGTGAAACTGATAATTTAGGGTGCGACGATTGGTGCTTT 1020 | | || | |||||||||| || ||| |||||| |||| ||||| |||||||| | Sbjct 90083 GGGACTATCACTGGGTATGGGTATGCAACAGATAATCTAGGATGCGATGATTGGTGTTCC 90142 Query 1021 ATGAAGACGTCGTGCACCTGGTATAAATGGGATATTAAAAGTAAAGGTGTTTATGGTAAA 1080 ||||| || || ||||| || || || |||||||| |||||||| | || ||| Sbjct 90143 ATGAAAACATCCTGCACTTGATACAAGTGGGATATCGTCAGTAAAGGGGAGCTTGAGAAA 90202 Query 1081 GTTTATGAGAAGTCATCAGAGATATGGGAG 1110 |||||||| | | | |||| || |||||| Sbjct 90203 GTTTATGAAAGGACTGCAGAAATGTGGGAG 90232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6985506034948