Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031690.1 Length=11308 Score E Sequences producing significant alignments: (Bits) Value seq313 113 3e-21 >seq313 Length=5067560 Score = 113 bits (124), Expect = 3e-21 Identities = 273/409 (67%), Gaps = 6/409 (1%) Strand=Plus/Plus Query 4509 TTTCAAAGAATTCATGAGTTCGAGATATTAGTTT-TGGATACCCAAGAAACTTTCCCATC 4567 |||||||||| ||||| || ||| | | || || | || |||| ||| || ||||| Sbjct 3837539 TTTCAAAGAACTCATGGGTACGACAAAACAGGTTCTCCATTCCCATAAAA-TTGCCCATT 3837597 Query 4568 ACATCAAATACAGGATTATTGGCTT--TGGCTCGTTGATGGTTATTCCATTTGCTATAAT 4625 ||| || ||||||| ||| |||| | ||| || | || |||||||| | |||| Sbjct 3837598 ACACGGAAAACAGGATCATTAGCTTCTTTCCTC--TGGTAATTGTTCCATTTAGTGTAAT 3837655 Query 4626 CAAAGTGATTGGCGATACAGATGTTCTCGTACCCTTCACTTCCTTGACCTGAAGTTGTAT 4685 | | || || || || | | || || || | | | | || | | | | | Sbjct 3837656 CGACATGTTTAGCAATGGTAACTTGATCATATCCATGAGTGCTTTTATATTCCGAGGCTT 3837715 Query 4686 CCATCATTTTCTTTATGACGGTAGTCATATCATCTGCCATAGTTAGTCCTTTAAACAATG 4745 | ||| || |||| ||| ||| | ||||||||||||| || || ||||| |||| | Sbjct 3837716 GAAGCATCTTATTTACGACAGTATTGTTATCATCTGCCATCGTCAGACCTTTGCACAAGG 3837775 Query 4746 GAACAAAGTGAGTCTTGATTAGGTGTTCTGTTATTACAAAATACTCTCGTAAAGCCCAGG 4805 ||| ||| || ||| || || | ||||| || ||||| ||||||| ||| ||||||| Sbjct 3837776 GAAAAAAATGGCGCTTAATCAGTAGCTCTGTGATAACAAAGTACTCTCTTAATGCCCAGG 3837835 Query 4806 TCAATAGAGCATAAAATCTTCCTCCAATCTTGATCTCTCGCTCTTTTCCTTTAAGTCCTA 4865 || |||||| |||||| ||| | | || | ||||| | ||||| | ||||||| Sbjct 3837836 ACATGAGAGCAAAAAATCGTCCGACTAGTTTTAGCTCTCTCGCTTTTGGTCGTAGTCCTA 3837895 Query 4866 TGATGAGATCCTCAAGAGTTAGTCCATTGTCATTGACTTCTTGCAGGAA 4914 | | | || | || | ||||| | ||||| || ||| ||||| Sbjct 3837896 TTACCAACTCGTTCAGTGCGAGTCCTTCATCATTTACCCGTTGGAGGAA 3837944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36069886267328