Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20dirus_20[genbank_20GCA_5F000349145.1_202013-03-28] 1,266 sequences; 216,307,690 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq313 113 3e-21 >seq313 Length=5067560 Score = 113 bits (124), Expect = 3e-21 Identities = 235/346 (68%), Gaps = 8/346 (2%) Strand=Plus/Plus Query 4474 TTCAAAGAATTCATGGGTTCTAGATATTAAGTTGGGGTATCCCA-AAAATTGTCCCATTA 4532 ||||||||| |||||||| | | | | | ||| ||||| ||||||| ||||||| Sbjct 3837540 TTCAAAGAACTCATGGGTACGACAAAACAGGTTCTCCATTCCCATAAAATTG-CCCATTA 3837598 Query 4533 CCTTGAATGTGGGATTATTGGCTGCTCCCCTCTGATGATTGTTCCATTTTTCATAATCTA 4592 | ||| |||| ||| ||| || |||||| | |||||||||||| ||||| | Sbjct 3837599 CACGGAAAACAGGATCATTAGCTTCTTTCCTCTGGTAATTGTTCCATTTAGTGTAATCGA 3837658 Query 4593 CATGGTTGGCAAAGCTTACATGATCATAATTATCCGTACCTTGACCATATGTGTTGTCCA 4652 |||| || |||| | | || |||||||| || || | || | | | | | | Sbjct 3837659 CATGTTTAGCAATGGTAACTTGATCATATCCATGAGTGCTTTTATATTCCGAGGCTTGAA 3837718 Query 4653 TTAATTTTTTAGTCAAAACGGTGGAGTTATC---TGCCATGGTTAGACCTTTAAATAATG 4709 | | ||| | | || || |||||| |||||| || |||||||| | || | Sbjct 3837719 GCA---TCTTATTTACGACAGTATTGTTATCATCTGCCATCGTCAGACCTTTGCACAAGG 3837775 Query 4710 GGACAAAATGCTTCTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAACTCCCAGG 4769 | | |||||| ||| ||||| ||||| || || ||||| ||||| || |||||| Sbjct 3837776 GAAAAAAATGGCGCTTAATCAGTAGCTCTGTGATAACAAAGTACTCTCTTAATGCCCAGG 3837835 Query 4770 ACATGAGCGCAAAAAATCTTCCTTTTATTTTCAGTTCACGCTCTTT 4815 ||||||| |||||||||| ||| || ||| || || | | |||| Sbjct 3837836 ACATGAGAGCAAAAAATCGTCCGACTAGTTTTAGCTCTCTCGCTTT 3837881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35845889457648