Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq1310 127 2e-25 >seq1310 Length=1959 Score = 127 bits (140), Expect = 2e-25 Identities = 294/439 (67%), Gaps = 8/439 (2%) Strand=Plus/Minus Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165 ||||||||| ||| ||| |||| ||| ||||| | | | | || || ||| | ||| Sbjct 1948 GATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCGGA 1889 Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225 || || ||||| |||||| ||||| || || | |||||| | | | || || Sbjct 1888 TTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATGATGCAAGCTTCATCAGGA 1829 Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285 ||| || | ||||| | | || || || || || ||||||| || |||||| Sbjct 1828 CAGAATACCTAGAGTTATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAAATGG 1769 Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345 |||||||||||| | |||| || | || || || || |||||||||| || Sbjct 1768 AATAACTATCAACGTGCTGAAGGAAACGACCCCGTCCTCGAGGTCTTGGGACGATTCTTT 1709 Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405 || ||||||| |||||| || ||||| ||||| ||| |||| ||| ||||||| Sbjct 1708 GGACTGCCTAAATTGTTTGTGAGGACTCACGAGTTCTTCAAAAATTCCTTGTTCTATTAT 1649 Query 10406 AACCAAAGACCAGACCTCATGATGGTGAGAGGACGGGAATGTCTGAACAGATT----GGG 10461 || | ||||| ||||||||| | || ||||| | | | | || | ||| ||| Sbjct 1648 AAGGATAGACCTGACCTCATGGTTGT-AGAGGGTGATCAGATTTCAA-ACATTCCTGGGG 1591 Query 10462 AGTGAAAGTGTGTTGGGAAGGACAAAAGGGAGGATTAGAAGGTTTGAGACAAAAGGGATG 10521 ||| | || ||| |||| | | || |||| || || || |||||||| || || Sbjct 1590 AGT--TCTTCTGATGGCAAGGTGAGGATGGGGGATGTGAGGGATTAAGACAAAAAGGGTG 1533 Query 10522 GAGCATATTAAATTATTTG 10540 ||| || | ||||||||| Sbjct 1532 GAGTCTAGTTAATTATTTG 1514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47560130034437