Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_017714.1 Length=15867 Score E Sequences producing significant alignments: (Bits) Value seq1544 107 2e-19 seq1310 96.9 4e-16 >seq1544 Length=1554 Score = 107 bits (118), Expect = 2e-19 Identities = 190/272 (70%), Gaps = 4/272 (1%) Strand=Plus/Minus Query 11017 GTAATTGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCATTG 11076 || || || || | |||||| || ||||| | || | ||| || ||||| | | Sbjct 277 GTGATCGGATTGAGAGCAAAAGAGCGGGAACTTAAACCTAAAGGGAGGTTCTTCGCTCTA 218 Query 11077 ATGAGTTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGA-ACATTT 11135 ||||||||| | |||| |||||| | || ||||||| ||||| ||||| |||| | Sbjct 217 ATGAGTTGGTCTCTTCGAGATTATTTTCTCTTAACAGAGTGCTTGAT-AAAGAGACATAT 159 Query 11136 TGTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAA-ACTGTAATTAAAAAGA 11194 || || ||| | |||||||| ||||||||||| |||||| || || || | || | Sbjct 158 AGTTCCCCTATGTACCGGATTAACCATGGCAGATGA-CTACAATACAGTCATAATTAAAA 100 Query 11195 TGATTGATGTATCAGCAGGACAAGGTACTGAAACCTATGAAAACATAACAATAGCGAATA 11254 |||| | | ||| ||||||| ||| | | ||||| | |||| || || || Sbjct 99 TGATGCAAGCTTCATCAGGACAGAATACCTAGAGTTATGACGAGGTAACCATCGCAAACC 40 Query 11255 ATATTGACTATGAGAAGTGGAATAATTATCAA 11286 || |||| || ||||| |||||||| |||||| Sbjct 39 ATGTTGATTACGAGAAATGGAATAACTATCAA 8 >seq1310 Length=1959 Score = 96.9 bits (106), Expect = 4e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 11093 GAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGA-ACATTTTGTGCCATTATTCAAA 11151 |||| |||||| | || ||||||| ||||| ||||| |||| | || || ||| | Sbjct 1950 GAGATTATTTTCTCTTAACAGAGTGCTTGAT-AAAGAGACATATAGTTCCCCTATGTACC 1892 Query 11152 GGATTAACTATGGCAGATGATCTACAA-ACTGTAATTAAAAAGATGATTGATGTATCAGC 11210 |||||||| ||||||||||| |||||| || || || | || ||||| | | ||| | Sbjct 1891 GGATTAACCATGGCAGATGA-CTACAATACAGTCATAATTAAAATGATGCAAGCTTCATC 1833 Query 11211 AGGACAAGGTACTGAAACCTATGAAAACATAACAATAGCGAATAATATTGACTATGAGAA 11270 |||||| ||| | | ||||| | |||| || || || || |||| || ||||| Sbjct 1832 AGGACAGAATACCTAGAGTTATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAA 1773 Query 11271 GTGGAATAATTATCAA 11286 |||||||| |||||| Sbjct 1772 ATGGAATAACTATCAA 1757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50654434397170