Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq1544 82.4 5e-12 >seq1544 Length=1554 Score = 82.4 bits (90), Expect = 5e-12 Identities = 173/258 (67%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 5958 AGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAAATT 6017 |||||| || || || | ||| | ||| |||||||| |||||||| |||| | Sbjct 263 AGCAAAAGAGCGGGAACTTAAACCTAAAGGGAGGTTCTTCGCTCTAATGAGTTGGTCTCT 204 Query 6018 AAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCA 6077 |||| || || | ||||||||| | ||||||| ||| | ||||| | | | Sbjct 203 TCGAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTAC 144 Query 6078 CGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTC 6137 ||| | |||||||| || ||| | | || || | ||||||||| | | || || Sbjct 143 CGGATTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATGATGCAAGCTTCATC 84 Query 6138 AGGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAACCATATTGACTATGAAAA 6197 |||||| ||| ||||| | | |||| || |||||| |||| || || || Sbjct 83 AGGACAGAATACCTAGAGTTATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAA 24 Query 6198 ATGGAATAACCATCAACG 6215 |||||||||| ||||||| Sbjct 23 ATGGAATAACTATCAACG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34098174594432