Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq1544 80.6 2e-11 seq1310 80.6 2e-11 >seq1544 Length=1554 Score = 80.6 bits (88), Expect = 2e-11 Identities = 132/188 (70%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 6316 GAGAATATTTCGTCATTACGGAGTATTTAATAAAGACACATTTTGTCCCCATGTTTAAGG 6375 |||| ||||| || | || |||| || ||||||| |||| | || ||| | | || | Sbjct 201 GAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCG 142 Query 6376 GATTGACAATGGCAGATGATCTAACAG-CTGTCATAAAGAAAATGATGGATACCTCATCA 6434 |||| || ||||||||||| ||| | | ||||||| ||||||||| | | |||||| Sbjct 141 GATTAACCATGGCAGATGA-CTACAATACAGTCATAATTAAAATGATGCAAGCTTCATCA 83 Query 6435 GGACAGGGTTTGGATAATTACGACTCAATTTGCATAGCCAATCACATTGATTATGAGAAG 6494 |||||| | | | ||| ||| | ||| || || || ||||||| ||||| Sbjct 82 GGACAGAATACCTAGAGTTATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAAA 23 Query 6495 TGGAACAA 6502 ||||| || Sbjct 22 TGGAATAA 15 >seq1310 Length=1959 Score = 80.6 bits (88), Expect = 2e-11 Identities = 280/429 (65%), Gaps = 16/429 (4%) Strand=Plus/Minus Query 6316 GAGAATATTTCGTCATTACGGAGTATTTAATAAAGACACATTTTGTCCCCATGTTTAAGG 6375 |||| ||||| || | || |||| || ||||||| |||| | || ||| | | || | Sbjct 1950 GAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCG 1891 Query 6376 GATTGACAATGGCAGATGATCTAACAG-CTGTCATAAAGAAAATGATGGATACCTCATCA 6434 |||| || ||||||||||| ||| | | ||||||| ||||||||| | | |||||| Sbjct 1890 GATTAACCATGGCAGATGA-CTACAATACAGTCATAATTAAAATGATGCAAGCTTCATCA 1832 Query 6435 GGACAGGGTTTGGATAATTACGACTCAATTTGCATAGCCAATCACATTGATTATGAGAAG 6494 |||||| | | | ||| ||| | ||| || || || ||||||| ||||| Sbjct 1831 GGACAGAATACCTAGAGTTATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAAA 1772 Query 6495 TGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTTAGGGTAATGGGACAATTC 6554 ||||| || | || || ||| || | || || | ||| |||||| |||| Sbjct 1771 TGGAATAACTATCAACGTGCTGAAGGAAACGACCCCGTCCTCGAGGTCTTGGGACGATTC 1712 Query 6555 CTTGGCTACCCCAATTTGATTGAACGCACCCATGAATTCTTTGAAAAAAGTC--TGATTT 6612 |||| || || ||| ||| | || || || ||||| ||||| || || | | Sbjct 1711 TTTGGACTGCCTAAATTGTTTGTGAGGACTCACGAGTTCTT--CAAAAATTCCTTGTTCT 1654 Query 6613 ACTATAATGGACGTCCAGACCTGATGCGAGTAAACGGAAACACCTTAGAAAACAGAACA- 6671 | ||||| | | || ||||| ||| ||| | || | | ||| || |||| Sbjct 1653 ATTATAAGGATAGACCTGACCTCATGGTTGTAGAGGGTGA----TCAGATTTCA-AACAT 1599 Query 6672 -CCTCTCAA---CGTTTGTTGGCAAGGTCAAGCTGGAGGCTTAGAGGGGCTTAGACAAAA 6727 ||| | | | || ||||||||| | | ||| || | ||||| | |||||||| Sbjct 1598 TCCTGGGGAGTTCTTCTGATGGCAAGGTGAGGATGGGGGATGTGAGGGATTAAGACAAAA 1539 Query 6728 AGGATGGAG 6736 ||| ||||| Sbjct 1538 AGGGTGGAG 1530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35307738220248