Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq1310 122 8e-24 seq1544 95.1 1e-15 >seq1310 Length=1959 Score = 122 bits (134), Expect = 8e-24 Identities = 319/475 (67%), Gaps = 10/475 (2%) Strand=Plus/Minus Query 10227 GATTATTTTGTATCTACTGAATACCTGATCAAGAAATATTTTGTACCCTTATTTGAAGGT 10286 ||||||||| | | || || | | |||| |||| | || | || ||| ||| | || Sbjct 1948 GATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCGGA 1889 Query 10287 CTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAGATGTTGGATGTCTCAAGCGGC 10346 |||| ||||| ||||| | |||||||| || | || ||| || | | ||| || Sbjct 1888 TTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATGATGCAAGCTTCATCAGGA 1829 Query 10347 CAGGGAACC-AGAGAATATGATTATATAACTATTGCAAACAACATCGATTATGAAAAATG 10405 ||| ||| |||| ||||| | |||| || |||||| | | ||||| || ||||| Sbjct 1828 CAGAATACCTAGAGT-TATGACGAGGTAACCATCGCAAACCATGTTGATTACGAGAAATG 1770 Query 10406 GAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATTTACTGTCATGGGAAAATTTTT 10465 |||||| |||||| | || |||| || || | ||| ||||| ||| || Sbjct 1769 GAATAACTATCAACGTGCTGAAGGAAACGACCCCGTCCTCGAGGTCTTGGGACGATTCTT 1710 Query 10466 GGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTTCCAAAAAAGCTTGATTTATTA 10525 || || ||||| | ||| || ||||| || |||||| |||| |||| | ||||| Sbjct 1709 TGGACTGCCTAAATTGTTTGTGAGGACTCACGAGTTCTTCAAAAATTCCTTGTTCTATTA 1650 Query 10526 TAACCAAAGGCCTGATTTAATGATGGTGAGAGG-TAATGA-ATGTCTCAACAAATCTGGA 10583 ||| | || ||||| | ||| | || ||||| | || | || || |||| |||| Sbjct 1649 TAAGGATAGACCTGACCTCATGGTTGT-AGAGGGTGATCAGATTTCA-AACATTCCTGGG 1592 Query 10584 GTAAAAGTATGTTGGGAGGGCCAAAAAGGGGGTTTGGAGGGACTAAGACAAAAAGGATGG 10643 | | || ||| | || | | ||||| | |||||| ||||||||||||| ||| Sbjct 1591 GAGTTCTTCTGATGGCAAGGTGAGGATGGGGGATGTGAGGGATTAAGACAAAAAGGGTGG 1532 Query 10644 AGTATTTTAAATTATTTGATGATTGAAAGAGAG-AGCAGGAT-TCGAAATACAAA 10696 ||| | | ||||||||| | || | ||| | | || || |||||||||||| Sbjct 1531 AGTCTAGTTAATTATTTG--GCTTTGATGAGGGAATCAAAATCTCGAAATACAAA 1479 >seq1544 Length=1554 Score = 95.1 bits (104), Expect = 1e-15 Identities = 185/271 (68%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 10149 GTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCTTTA 10208 ||||| || |||| ||| || || || ||||||||| |||| || ||||| || || Sbjct 277 GTGATCGGATTGAGAGCAAAAGAGCGGGAACTTAAACCTAAAGGGAGGTTCTTCGCTCTA 218 Query 10209 ATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATATTTT 10268 ||| || | | ||||||||| | | || || | | |||| |||| | || | Sbjct 217 ATGAGTTGGTCTCTTCGAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATA 158 Query 10269 GTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAGATG 10328 || ||| ||| | || |||| ||||| ||||| | |||||||| || | || ||| Sbjct 157 GTTCCCCTATGTACCGGATTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATG 98 Query 10329 TTGGATGTCTCAAGCGGCCAGGGAACC-AGAGAATATGATTATATAACTATTGCAAACAA 10387 || | | ||| || ||| ||| |||| ||||| | |||| || |||||| | Sbjct 97 ATGCAAGCTTCATCAGGACAGAATACCTAGAGT-TATGACGAGGTAACCATCGCAAACCA 39 Query 10388 CATCGATTATGAAAAATGGAATAATTATCAA 10418 | ||||| || ||||||||||| |||||| Sbjct 38 TGTTGATTACGAGAAATGGAATAACTATCAA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47956917770713