Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_025396.1 Length=15442 Score E Sequences producing significant alignments: (Bits) Value seq1310 93.3 4e-15 seq1544 87.8 2e-13 >seq1310 Length=1959 Score = 93.3 bits (102), Expect = 4e-15 Identities = 288/439 (66%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 10657 GAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAATATTATGTACCATTGTTTGAAG 10716 |||| || ||| | ||| || | |||||| |||| | || || || | | | | Sbjct 1950 GAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATAGTTCCCCTATGTACCG 1891 Query 10717 GACTTACAATGGCAGATGATTTGAACACTGT---AATTAAAAAGATGCTGGACGTGTCAT 10773 || | || ||||||||||| | || || || |||||||| ||||| | | |||| Sbjct 1890 GATTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATGATGC---AAGCTTCAT 1834 Query 10774 CCGGTCA-AGGAACAAGAAACTATGATTATGTATCCATAGCCAACAACATTGATTATGAG 10832 | || || | | | ||| ||||| | ||| |||| || ||| | ||||||| ||| Sbjct 1833 CAGGACAGAATACCTAGAGT-TATGACGAGGTAACCATCGCAAACCATGTTGATTACGAG 1775 Query 10833 AAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGGTATTCAGAGTAATGGGACAA 10892 ||||||||||| |||||| | ||| ||| | || || || || |||||| | Sbjct 1774 AAATGGAATAACTATCAACGTGCTGAAGGAAACGACCCCGTCCTCGAGGTCTTGGGACGA 1715 Query 10893 TTCCTTGGAATGGAAAATCTTATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGTC 10952 ||| ||||| || || | | || |||| || || ||||| ||||| ||| || Sbjct 1714 TTCTTTGGACTGCCTAAATTGTTTGTGAGGACTCACGAGTTCTTCAAAAATTCCTTGTTC 1655 Query 10953 TATTATAACCAGCGAGCAGACTTAATGATGGTGCAAGGGAGA-CATTGTTTAAATAAAAC 11011 |||||||| | || | ||| | ||| | || |||| || || || ||| | | Sbjct 1654 TATTATAAGGATAGACCTGACCTCATGGTTGT-AGAGGGTGATCAGATTTCAAACATTCC 1596 Query 11012 AGGAATCAAGGTGTGTTGGGAGGGTCAGAAGGGGGGATTAGAAGGGTTGAGGCAAAAAGG 11071 || | || ||| | ||| || | ||||||| || || || || |||||||| Sbjct 1595 TGGGGAGTTCTTCTGATGGCAAGGTGAGGATGGGGGATGTGAGGGATTAAGACAAAAAGG 1536 Query 11072 ATGGAGTATATTGAATTAT 11090 |||||| || | |||||| Sbjct 1535 GTGGAGTCTAGTTAATTAT 1517 >seq1544 Length=1554 Score = 87.8 bits (96), Expect = 2e-13 Identities = 186/274 (68%), Gaps = 8/274 (3%) Strand=Plus/Minus Query 10581 GTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCTCTTTA 10640 ||||| || || | ||| || || | || |||||| |||| ||||| ||| || || Sbjct 277 GTGATCGGATTGAGAGCAAAAGAGCGGGAACTTAAACCTAAAGGGAGGTTCTTCGCTCTA 218 Query 10641 ATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAATATTAT 10700 ||||||| | |||| || ||| | ||| || | |||||| |||| | || Sbjct 217 ATGAGTTGGTCTCTTCGAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATA 158 Query 10701 GTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGT---AATTAAAAAG 10757 || || | | | ||| | || ||||||||||| | || || || |||||||| | Sbjct 157 GTTCCCCTATGTACCGGATTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATG 98 Query 10758 ATGCTGGACGTGTCATCCGGTCA-AGGAACAAGAAACTATGATTATGTATCCATAGCCAA 10816 |||| | | ||||| || || | | | ||| ||||| | ||| |||| || || Sbjct 97 ATGC---AAGCTTCATCAGGACAGAATACCTAGAGT-TATGACGAGGTAACCATCGCAAA 42 Query 10817 CAACATTGATTATGAGAAATGGAATAATTATCAA 10850 | | ||||||| |||||||||||||| |||||| Sbjct 41 CCATGTTGATTACGAGAAATGGAATAACTATCAA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49294476430095