Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq1544 86.0 6e-13 >seq1544 Length=1554 Score = 86.0 bits (94), Expect = 6e-13 Identities = 183/271 (68%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 10583 GTGATAGGTTTAAAAGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTA 10642 ||||| || || | ||| ||||| |||| |||||| |||| ||||| ||| || || Sbjct 277 GTGATCGGATTGAGAGCAAAAGAGCGGGAACTTAAACCTAAAGGGAGGTTCTTCGCTCTA 218 Query 10643 ATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTAT 10702 ||||||| | |||| || ||| | ||| || | |||||| || | | || Sbjct 217 ATGAGTTGGTCTCTTCGAGATTATTTTCTCTTAACAGAGTGCTTGATAAAGAGACATATA 158 Query 10703 GTACCATTATTCGAAGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATG 10762 || || ||| ||| | || ||||| ||||| | ||||||||||| | || ||| Sbjct 157 GTTCCCCTATGTACCGGATTAACCATGGCAGATGACTACAATACAGTCATAATTAAAATG 98 Query 10763 CTGGATGTGTCCTCCGGCCA-AGGAACAAGAAACTATGATTATGTGTCAATAGCTAACAA 10821 || | | || || || || | | | ||| ||||| | || | || || ||| | Sbjct 97 ATGCAAGCTTCATCAGGACAGAATACCTAGAGT-TATGACGAGGTAACCATCGCAAACCA 39 Query 10822 TATTGATTATGAAAAATGGAATAATTATCAA 10852 | ||||||| || ||||||||||| |||||| Sbjct 38 TGTTGATTACGAGAAATGGAATAACTATCAA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49300876232293