Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_031244.1 Length=12774 Score E Sequences producing significant alignments: (Bits) Value seq2663 174 1e-39 >seq2663 Length=506940 Score = 174 bits (192), Expect = 1e-39 Identities = 312/449 (69%), Gaps = 25/449 (6%) Strand=Plus/Minus Query 8206 ATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTACTCTTGCTGGCTCTGGAGGAT 8265 ||||| ||||| || ||| | ||||| || ||| | || ||| || ||| |||||||| Sbjct 389581 ATGAAACAGAAAGCATGGGCGCATATTACATCTGCGGTTCTCAAACTTGCTTTGGAGGAT 389522 Query 8266 CTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAATCAGATTGTCATACTGCATGTA 8325 ||| | | ||| || || |||||||| || || || ||||||||||| ||||| | Sbjct 389521 CTTGACCTTAGAGGCAACGTAATGGGTCAAGGAGATAACCAGATTGTCATTCTGCACACA 389462 Query 8326 --AAGAAATCGGACAACGCAGGTGAGATCACAAGAA-------AATTCAT-TCAGACTAT 8375 ||| || || | || ||| || || |||| || |||| ||||| | Sbjct 389461 TCAAGGAAC--GATGAGATAGTTGACATGACTAGAAGGTTTATAAGTCATATCAGATCAC 389404 Query 8376 TATCGAGATGTTTGATAGCATCAACCATAAAGTAAAACCTAGAGAGACTTGGTTTTCTCA 8435 ||| | | | ||| |||||||| || || || || || || |||||||| | Sbjct 389403 TAT-----TTTCTCATA---TCAACCATCGTGTTAAGCCGAGTGAAACCTGGTTTTCAAA 389352 Query 8436 TCATCTCCACGAGTATGGAAAGACAAGAATATGGAAAGGCTGTGCCGTTCCGTCA--GGG 8493 | || || |||||||| || |||||||||||||| ||||| |||| ||| || Sbjct 389351 GATAATTCATGAATATGGAAAAACTAGAATATGGAAAGGATGTGCAGTTC--TCATTGGT 389294 Query 8494 ACAAAGAAAGCTGCTAGATTTATCCCTGATGTAAATGACGGTCTGTTCTCCATTCACTCT 8553 || || |||||| | | | ||| ||||||| | ||||| || ||||||| || || Sbjct 389293 ACCAA-AAAGCTTCAAAAATTAACCCTGATATCAATGATGGGTTGTTCTCAATAACGTCA 389235 Query 8554 TGCATGTCTACAATAAATACTATCTCTGAATCAATAGCAAAGGCATCCTGGACTCCAGAC 8613 | ||||| || | ||||| || | || |||||||||||| |||| |||| ||| ||| Sbjct 389234 AGTATGTCAACTCTTAATACCATAACAGACTCAATAGCAAAGTCATCATGGAATCCGGAC 389175 Query 8614 ATCGCTTTCATAATGAATCAAATGGCGCA 8642 | |||| ||||||||||| ||| |||| Sbjct 389174 GTTCCTTTAATAATGAATCAGATGTCGCA 389146 Score = 87.8 bits (96), Expect = 1e-13 Identities = 229/343 (67%), Gaps = 16/343 (5%) Strand=Plus/Minus Query 9064 GACAATATAATCAAGATCCTCGACTCCATGACTCCTTGCTATGCCCAGTTGGCCAACAAT 9123 |||||||| || ||||||| ||| |||||| ||||||||||||||||| | ||||| Sbjct 388391 GACAATATCATAAAGATCCGAGACACCATGAACCCTTGCTATGCCCAGTTTGGAAACAAC 388332 Query 9124 ATCTTGAAACTCTCTAATGCCGGTATAGGAAAGAGGTTACAAAATAAATTGACATCTTCA 9183 | | ||| || ||| | || || |||||||| | | || | || | || Sbjct 388331 TTGCTTAAAATCAGCAATCCGGGAATTGGAAAGAGACTCC------AACTAACTCCCTCT 388278 Query 9184 AAAACTATAGAGAAAGCAACAAAAATGTT--TTACAATATATCATTGATAGATTTAATCC 9241 ||||| || |||| ||| || | |||||| | || | || ||||||||| |||| Sbjct 388277 AAAACAATTGAGAGAGCTACTACAATGTTCCTGGCA--ACTTCTTTGATAGATATAAT-A 388221 Query 9242 GTCA-GAAAAATGAACAGCTTATAGAAGAGACAAAGAAAAGGATTAACCGAGACAATTCA 9300 || | ||||| |||| | | || ||| ||| || || ||||| ||| || | Sbjct 388220 GTGACAAAAAACAAACACTTAAGAGCAGAATTAAAAAAGAGATTTAACAATGACCATCGA 388161 Query 9301 TACACAAACAGGAAGTTTCTCCAAGGAGGATGCCCTTATACG--GAGGCAAAGAGACTCA 9358 | | | || | || |||| ||| || ||||| ||||| || ||| | | | | Sbjct 388160 TCCTCCAATCTCAGGTATCTCAAAGACGGGTGCCC--ATACGAAGAAGCAGTAACAATTA 388103 Query 9359 GAGAACATGGTTGGAAGAAAGAATTTATCGAACTCACTAAACC 9401 |||| |||||||| || |||| || ||||| ||||| || Sbjct 388102 GAGAGGTGGGTTGGAATAAGAAATTCATAGAACTGACTAAGCC 388060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40760374247736