Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_031308.1 Length=2217 Score E Sequences producing significant alignments: (Bits) Value seq2153 210 3e-51 seq664 199 6e-48 >seq2153 Length=742637 Score = 210 bits (232), Expect = 3e-51 Identities = 504/761 (66%), Gaps = 16/761 (2%) Strand=Plus/Plus Query 964 AGCATAATGGGGTATGGGTGTGAAACTGATAATTTAGGGTGCGACGATTGGTGCTTTATG 1023 || |||| || || || |||| || || | ||| || |||||| ||||||||||||| Sbjct 527104 AGTATAACAGGTTAAGGATGTGGTACAGACAGTTTGGGTTGCGACACTTGGTGCTTTATG 527163 Query 1024 AAGACGTCGTGCACCTGGTATAAATGGGATATTAAAAGTAAAGGTGTTTATGGTAAAGTT 1083 || | ||||| |||| |||||| ||| |||| | || | ||| | ||| Sbjct 527164 AAAGTTGCATGCACATGGTGGAAATGGAGGATTGAAAGCACTGGGGAGCTTGGATATGTT 527223 Query 1084 TATGAGAAGTCATCAGAGATATGGGAGGTCATTCTCAGGATTGATTACCAGAACGTTACA 1143 ||||||| | ||||||| ||||||||||| ||| | | |||||||| ||||| | || Sbjct 527224 TATGAGACGACATCAGAAATATGGGAGGTACATCTGAAGGTTGATTACAAGAACATCACT 527283 Query 1144 ACGAGGCATAAGGTTAACGTGAATAATCCCAGGGTCAATCTGGATGGACTTATGGATGGT 1203 || | | ||| | ||||| || ||| | | || ||||| || ||| | | || Sbjct 527284 ACAAAGTATAGCATAAACGTCAACAATACACGTGTAAATCTAGACGGAATCCTAGAGAAC 527343 Query 1204 ATACCAATATATATAACCAGTATCTCATCAGAAA---CTGATAATGTACCAAATGGGATA 1260 || | ||||| || || | | | || |||| | |||| | || ||||| Sbjct 527344 ATGCTTATATACATGACAGGCTTTACTTCTGAAATAACCGATAGT---CCTAATGGACGC 527400 Query 1261 TTGGAGTACTTAGGTACAGGTTATGCTGTCAAAGCCTCTCAGATGAATATGCCTGAGACA 1320 | | ||| || | ||| |||| |||||||| || ||| |||||||| || ||| Sbjct 527401 ATCGTATACAACGGGAAAGGGTATGAAGTCAAAGCATCATCGATAAATATGCCAGAAACA 527460 Query 1321 GATATAATTGGTGATTACCAA-ATAAGCCTTGACAAAGAGACGTATGCCTTCAATATGCA 1379 || || ||||| || || ||| || ||||| |||||| ||| | | | |||| ||| Sbjct 527461 GACATCATTGGAGACTATCAAGATTAGCCTAGACAAACTGACACACACTTACAATGAGCA 527520 Query 1380 TAATGTCAAATGTGAAACTGAATCTTGCAGAGCATTTTGCAATGCACCAGAACCGAAGAT 1439 | || | |||||| |||||| || | | | ||||||| || ||||| || | Sbjct 527521 TGTAGTAAGATGTGAGGTTGAATCATGTAATGTGTATTGCAATATGCCTGAACCAAAATT 527580 Query 1440 GACAAGATTCATAAGGATGATTAAAAGGATGAATGAGGTTGAAATAATGAATATTGGGTC 1499 | |||||| ||| ||||| || ||||||||||| || | |||| Sbjct 527581 AAGGCGATTCAGAAGAATGATGCAA---------GAGGTTGAAATTATCTCTTTTGGCAA 527631 Query 1500 CGGGCATGTGATAGAAACAAATAGGCAGATATCAGCTATTGTTGGGGTTCTCGTTGGGAA 1559 | | ||||||| | ||| || ||| | || || || | | | | || || Sbjct 527632 TGAATACATGATAGAGATAAACAGACAGGTCAATGCGATAGTGAGTATGTTAATCGGCAA 527691 Query 1560 TGTTAATCTTAAAAACCTGCAAGTTGAAAAAGCACAGTGCTCACTGGAACAAATAGGTAC 1619 |||| || | || ||||| || || || || ||||| |||||||| || || || || || Sbjct 527692 TGTTGATATAAAGAACCTTCAGGTCGAGAAGGCACAATGCTCACTTGAGCAGATTGGAAC 527751 Query 1620 ATACTCTTGTACTGGTTGTGCTGAGGAACCTTATGTTATACTTCAGGCACATGATATAAA 1679 || || || ||||| ||| | | ||||||||||| |||| || |||| | ||||| Sbjct 527752 ATTATCGTGCACTGGCTGTTCATATGAACCTTATGTAATACGGCATTCACACAACATAAA 527811 Query 1680 GTCAGAAGGCATTTTACCCATAGAATCAAATTGTACATTTG 1720 ||||||||||| | || | || || || || || |||| Sbjct 527812 ATCAGAAGGCATAATGCCTTTTGAGTCCAACTGCACTTTTG 527852 >seq664 Length=32692 Score = 199 bits (220), Expect = 6e-48 Identities = 320/453 (71%), Gaps = 9/453 (2%) Strand=Plus/Minus Query 1306 AATATGCCTGAGACAGATATAATTGGTGATTACCAAATAAGCCTTGACAAAGAGACGTAT 1365 || ||||| | ||||| |||||||| ||||||| || ||||| || ||| | || | Sbjct 27206 AACATGCCAAAAACAGACATAATTGGAGATTACCTGATCAGCCTGGATAAACAAACCCAA 27147 Query 1366 GCCTTCAATATGCATA-ATG-TCAAATGTGAAACTGAATCTTGCAGAGCA--TTTTGCAA 1421 | | |||| | ||| ||| | | |||||| ||| || |||| | | || || | Sbjct 27146 ACATACAAT--GAATACATGGTTAGGTGTGAAGTTGAGTCATGCAAGGTAAATTGTGACA 27089 Query 1422 TGCACCAGAACCGAAGATGACAAGATTCATAAGGATGATTAAAAGGATGAATGAGGTTGA 1481 ||| | ||||| ||| | | |||||| | ||| ||| | | | ||| | || || || Sbjct 27088 TGC--CTGAACCAAAGTTAAGAAGATTTAGAAGAATGTTGGACAAGATACAAGAAGTAGA 27031 Query 1482 AATAATGAATATTGGGTCCGGGCATGTGATAGAAACAAATAGGCAGATATCAGCTATTGT 1541 ||||| | |||| | || |||| ||||||||||| || | | || || || Sbjct 27030 CATAATATCTGTTGGTAGTGAATATATGATTGAAACAAATAGACAAGTTACTGCAATAGT 26971 Query 1542 TGGGGTTCTCGTTGGGAATGTTAATCTTAAAAACCTGCAAGTTGAAAAAGCACAGTGCTC 1601 | || | || |||||| | | |||||| | ||||||||||||||||| | || Sbjct 26970 AAACATGCTGATAGGCAATGTTGA-CATAAAAATGTTCAAGTTGAAAAAGCACAAAGTTC 26912 Query 1602 ACTGGAACAAATAGGTACATACTCTTGTACTGGTTGTGCTGAGGAACCTTATGTTATACT 1661 ||| ||||| || || |||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 26911 ACTTGAACAGATTGGCACATTTTCATGTACAGGTTGCTCTTATGAACCATATGTCATACT 26852 Query 1662 TCAGGCACATGATATAAAGTCAGAAGGCATTTTACCCATAGAATCAAATTGTACATTTGC 1721 |||| ||||| |||||||||||||||| || | || | |||||||||||||| |||| Sbjct 26851 TCAGTCACATAATATAAAGTCAGAAGGAATAATGCCTTTTGAATCAAATTGTACTTTTGA 26792 Query 1722 AAAAGATTATATATCCTGTTCCCTAGACCCTTA 1754 || | |||| || || ||||||| ||| || || Sbjct 26791 AAGAAATTAAATTTCATGTTCCCCAGATCCGTA 26759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6985401604594