Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq13676 87.8 1e-13 >seq13676 Length=71703 Score = 87.8 bits (96), Expect = 1e-13 Identities = 265/403 (66%), Gaps = 11/403 (3%) Strand=Plus/Plus Query 6070 TGGCATGAATTGCCACTTTCCAAGATATACGAGATACCTGATTTAATAGATCCCTCTGTG 6129 ||| || ||||||| || |||| | |||||||| ||| | | ||||| | Sbjct 7476 TGGAATCAATTGCCTCTACTCAAGTGCTTTGAGATACCAGATATGGTTGATCCAACAACA 7535 Query 6130 ATTTACTCTGACAAGAGTCATTCCATGAATCGAAGTGAGATTATACAACACATATTGGAG 6189 |||||||| ||||| || || |||||| | | ||| || | | | || | | Sbjct 7536 ATTTACTCCGACAAAAGACACTCCATGGACTTAGATGAAATAGTGAATTTCTTAATAGC- 7594 Query 6190 CAC---CCTCTAA-AGCCGATCCCTACAAGAAAAGTACTAAGAACATTATTGGAAAAACC 6245 ||| | || || |||| || | || ||| |||||| | || | |||||| ||| Sbjct 7595 CACAGACTTCCAACAGCCTATACAGACTAGATCAGTACTGAAAAGCCAAATGGAAAGACC 7654 Query 6246 AGCTACAGACTGGCCATCATTCTTGAAAAGGATAGATGAAGAAGG--TCTAAATGAA-GA 6302 |||||||||| | | || ||| | | | || |||| || ||| || || || Sbjct 7655 AGCTACAGACATCAAAGCTTTTTTGCAGAAGGTAAATGACACTGGACTCTCTATAAATGA 7714 Query 6303 GGCTTTAGTCATAGGATTAAAAGGTAAGGAAAGAGAGCTGAAACAAGCAGGTAGATTCTT 6362 | ||||| |||||| | | || || || || || |||||| || ||| || ||||| Sbjct 7715 G---TTAGTAATAGGACTGAGAGCGAAAGAGAGTGAACTGAAATTAGTAGGGAGGTTCTT 7771 Query 6363 TTCATTGATGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATATTTAATAAAACA 6422 | | | ||||| |||| ||| | ||||| ||||| || || || | || || ||| Sbjct 7772 TGCTCTCATGTCGTGGGCTTTAAGGGAGTATTTTGTAATCACAGAGTTATTGATCAAAAC 7831 Query 6423 CCATTTTGTACCTCTATTTAAGGGATTAACAATGGCAGATGAT 6465 || ||||| || || | | ||||||| |||||| ||| ||| Sbjct 7832 TCACTTTGTGCCACTCTGTCAGGGATTGACAATGAGAGACGAT 7874 Score = 78.8 bits (86), Expect = 7e-11 Identities = 180/270 (67%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 6541 GCGAACCATATAGATTATGAAAAGTGGAACAATCATCAAAGGAAAGAATCAAATGGACCA 6600 || || ||| ||||||| || |||||||| || ||||| ||||| |||| || Sbjct 7905 GCAAATCATGTAGATTACAGCAAATGGAACAACCACCAAAGAAAAGAGGCAAACAATCCT 7964 Query 6601 GTTTTCCGTGTGATGGGCCAATTCTTGGGCTATCCATCTTTGATAGAGAGAACGCATGAG 6660 |||| || ||||| ||||| ||||| | ||| | || || ||||| Sbjct 7965 ACTTTCAAGGTCATGGGGCAATTTTTGGGAATGGAAAACTTGTTTTGTAGGACTCATGAA 8024 Query 6661 TTCTTTGAGAAAAGTCTTGTTTATTACAATGGTAGACCAGACTTGATGAAGGTAGAAAAT 6720 ||||||||||| ||| | ||||| | ||||||||||||||||| ||||| || Sbjct 8025 TTCTTTGAGAATGCGCTTTTCAATTACCGCGATAGACCAGACTTGATGACCATAGAAGAT 8084 Query 6721 GGTGTAGTATTGAATAAA---ACAGATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGG 6777 || | || | |||| | ||| || ||||| |||| | || || || || ||| Sbjct 8085 GGGAAAATAATTAATAGAGGTCCAG---ATCTAGTTAGCTGACAAGGACAGGCGGGCGGG 8141 Query 6778 TTAGAGGGACTGAGACAAAAAGGTTGGAGT 6807 | | || || | |||||||| |||||| Sbjct 8142 TGTTAAGGTCTCCGTCAAAAAGGGTGGAGT 8171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35530240369540