Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq216 100 2e-17 >seq216 Length=1162 Score = 100 bits (110), Expect = 2e-17 Identities = 193/278 (69%), Gaps = 10/278 (4%) Strand=Plus/Minus Query 10106 AGGTCCTTATCCCCCTTACTTAGGATCAAAAACCTCAGAGACAACCTCCCTAATTCAACC 10165 |||||| ||| || || || | || ||||| || ||||| || |||| ||||| Sbjct 722 AGGTCCCTATAGACCATATTTGGACTCTAAAACATCCGAGACTACTAGTTTAATCCAACC 663 Query 10166 ATGGGATAGAGAGACCAATATTCCACTCCTTAAAAGAGC-TGTTCGTATGAGAAATGCAA 10224 ||||| ||||| ||||||||||| | | |||||||| | ||| | ||| | | Sbjct 662 GTGGGAAAGAGACACCAATATTCCGATTATAAAAAGAGCGTATTCAC-TAAGACGAGTTA 604 Query 10225 TCTCTTGGTTTGTTGATCCGGAAAGTAAGCTTGCA--AGCAGTATCTTAAACAACCTGGA 10282 || |||||||| | || || || ||| | ||| |||| |||| ||||| | Sbjct 603 TCAACTGGTTTGTGAACCCTGACAGCAAGATGGCAGAAGCA--ATCTACAACAATATTCG 546 Query 10283 GTCACTAACAGGTGAAGA--CTGGACTGAACATAATGTCGGGTTTAAACGAACAGGATCA 10340 || |||| |||||||| || || ||| | ||| || || || |||||||| || Sbjct 545 TTCGTTAACGGGTGAAGATGCTAGA--GAAGTTTCTGTGGGTTTCAAGCGAACAGGTTCT 488 Query 10341 GCATTGCATAGATTCACTTGTGCAAGACAATCCAATGG 10378 | ||| || |||||| ||||||| ||||||||||| || Sbjct 487 GGATTACACAGATTCTCTTGTGCCAGACAATCCAACGG 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41458879307384