Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_031240.1 Length=11541 Score E Sequences producing significant alignments: (Bits) Value seq13676 107 1e-19 >seq13676 Length=71703 Score = 107 bits (118), Expect = 1e-19 Identities = 254/394 (64%), Gaps = 45/394 (11%) Strand=Plus/Plus Query 6411 TAAATGATTTTGGGATCTCAATTGAACATTTAGTGATTGGTTTAAAAGAGAAAGAAAGAG 6470 ||||||| ||| |||| || | | ||||| || || | | || |||||| || | Sbjct 7687 TAAATGACACTGGACTCTCTATAAATGAGTTAGTAATAGGACTGAGAGCGAAAGAGAGTG 7746 Query 6471 AGTTGAAGATAGGAGGAAGATTTTTCGCTTTAATGTCTTGGGAGATTAGAGATTATTTTG 6530 | |||| ||| ||| || || || ||| | ||||| |||| | || || ||||||| Sbjct 7747 AACTGAAATTAGTAGGGAGGTTCTTTGCTCTCATGTCGTGGGCTTTAAGGGAGTATTTTG 7806 Query 6531 TAATGACAGAATATTTAATTAAAACTCATTTTGTGCCTCTCTTTGACGGATTAACAATGG 6590 |||| ||||| | || || |||||||| |||||||| |||| | | ||||| |||||| Sbjct 7807 TAATCACAGAGTTATTGATCAAAACTCACTTTGTGCCACTCTGTCAGGGATTGACAATGA 7866 Query 6591 CTGATGATCTAACAACTGTTATCGGAAAGATTTTGCGAAACACTGAAGGACAAGGAGAAG 6650 || || |||| || || Sbjct 7867 GAGACGA-----------TTAT----------------AATAC----------------- 7882 Query 6651 ATGGATATGAAAGTGTCACCTTCGCAGATCATATAGATTACGAAAAATGGAACAATCATC 6710 | ||||||| || || | ||| ||||| |||||||| ||||||||||| || | Sbjct 7883 -TTGATATGATCAAGTAACTATGGCAAATCATGTAGATTACAGCAAATGGAACAACCACC 7941 Query 6711 AGAGAGGAGAGGCAAATAATCCAACTTTCAAAGTTATGGGACAATTTTTAGGATACCCCA 6770 | ||| ||||||||| ||||| |||||||| || ||||| |||||||| ||| | Sbjct 7942 AAAGAAAAGAGGCAAACAATCCTACTTTCAAGGTCATGGGGCAATTTTTGGGAATGGAAA 8001 Query 6771 ATTTAATTCAGAGAACTCATGAAATATTTGAGAA 6804 | || || || ||||||||| | |||||||| Sbjct 8002 ACTTGTTTTGTAGGACTCATGAATTCTTTGAGAA 8035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36810032908740