Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_031302.1 Length=11370 Score E Sequences producing significant alignments: (Bits) Value seq13676 102 6e-18 >seq13676 Length=71703 Score = 102 bits (112), Expect = 6e-18 Identities = 223/344 (65%), Gaps = 45/344 (13%) Strand=Plus/Plus Query 6441 AAGGAGCGCGAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGG 6500 || ||| | ||||||||| | | ||| || |||||||| | ||||| |||| ||||| Sbjct 7737 AAAGAGAGTGAACTGAAATTAGTAGGGAGGTTCTTTGCTCTCATGTCGTGGGCTTTAAGG 7796 Query 6501 GATTATTTTGTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGA 6560 || ||||||||||| || |||| ||||| ||||| |||||||| || || | | | ||| Sbjct 7797 GAGTATTTTGTAATCACAGAGTTATTGATCAAAACTCACTTTGTGCCACTCTGTCAGGGA 7856 Query 6561 CTCACAATGGCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGA 6620 | |||||| ||| || ||| || Sbjct 7857 TTGACAATGAGAGACGA-TTA-------TA------------------------------ 7878 Query 6621 CAAGGAGATACATCCTATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGG 6680 |||| | ||||| | || ||| | || ||||| | ||||| |||||| Sbjct 7879 -------ATACTTGATATGATCAAGTAACTATGGCAAATCATGTAGATTACAGCAAATGG 7931 Query 6681 AATAATCACCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTA 6740 || || ||||||||| ||||| |||||| ||||| |||| ||| ||||| |||||||| Sbjct 7932 AACAACCACCAAAGAAAAGAGGCAAACAATCCTACTTTCAAGGTCATGGGGCAATTTTTG 7991 Query 6741 GGGTACCCAAATTTGATTGAAAGAACACATGAAATCTTTGAAAA 6784 || ||| ||| || || || |||||| ||||||| || Sbjct 7992 GGAATGGAAAACTTGTTTTGTAGGACTCATGAATTCTTTGAGAA 8035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36262921598232