Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20No._204_20[genbank_20GCA_5F000956215.1_202015- 03-19] 14,407 sequences; 146,379,160 total letters Query= NC_031691.1 Length=11238 Score E Sequences producing significant alignments: (Bits) Value seq13676 96.9 2e-16 >seq13676 Length=71703 Score = 96.9 bits (106), Expect = 2e-16 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 4475 TCAAAGAATTCATGGGTTCTAGATATTAAGTTGGGGTATCCCAAAAATTGTCCCATTACC 4534 |||||||||||||| || ||| | | ||||| |||||||||||| ||||| ||| Sbjct 8032 TCAAAGAATTCATGAGTCCTACAAAACAAGTTTTCCATTCCCAAAAATTGCCCCATGACC 7973 Query 4535 TTGAATGTGGGATTATTGGCTGCTCCCCTCTGATGATTGTTCCATTTTTCATAATCTACA 4594 ||||| || ||||| || || || || || || ||||||||||| ||||||||| Sbjct 7972 TTGAAAGTAGGATTGTTTGCCTCTTTTCTTTGGTGGTTGTTCCATTTGCTGTAATCTACA 7913 Query 4595 TGGTTGGCAAAGCTTACATGATCATA 4620 || || || | |||| |||||||| Sbjct 7912 TGATTTGCCATAGTTACTTGATCATA 7887 Score = 82.4 bits (90), Expect = 5e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 4708 TGGGACAAAATGCTTCTTGATCAGATATTCTGTTATTACGAAGTATTCTCTCAACTCCCA 4767 ||| ||||| || | ||||||| | ||||| ||||| || || || || || |||| Sbjct 7844 TGGCACAAAGTGAGTTTTGATCAATAACTCTGTGATTACAAAATACTCCCTTAAAGCCCA 7785 Query 4768 GGACATGAGCGCAAAAAATCTTCCTTTTATTTTCAGTTCACGCTCTTTGCCTTTAAGTCC 4827 |||||||| ||||| || || ||| || ||||||||||| |||||| || | ||||| Sbjct 7784 CGACATGAGAGCAAAGAACCTCCCTACTAATTTCAGTTCACTCTCTTTCGCTCTCAGTCC 7725 Query 4828 GAT 4830 || Sbjct 7724 TAT 7722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35840590060296