Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_008514.1
Length=11545
Score E
Sequences producing significant alignments: (Bits) Value
seq778 116 3e-22
>seq778
Length=78982
Score = 116 bits (128), Expect = 3e-22
Identities = 280/412 (68%), Gaps = 14/412 (3%)
Strand=Plus/Minus
Query 6698 GATCTGGTTATCGGATTGAAAGGGAAAGAAAGAGAATTAAAGAAAGC---AGGACGTTTC 6754
|| ||||| || ||||||| | || || || ||||| |||| | ||| || |||
Sbjct 32520 GAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATT---GAAACCTAAAGGTCGGTTC 32464
Query 6755 TTCTCCCTTATGTCATGGAAATTACGAGAGTATTTCGTCATGACAGAATATCTGATCAAA 6814
|| |||| ||| ||| ||||||||| || |||||||| || || || |||| ||
Sbjct 32463 TTTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAG 32404
Query 6815 CACCACTTTGTCCCACTATTTCATGGATTGACTATGGCGGATGAC-ATGACTCAAGTTAT 6873
| ||||| ||||| ||| || || |||||||| ||||| | || || || |
Sbjct 32403 AAGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACA-GTGGT 32345
Query 6874 GAAGAAAATGTTAGACAGAAGTCAAGGGCAAGG-AGAGAATGACTACCA-GAGAGTCAGT 6931
|| |||||| | | | | || ||| | | || || || | ||| || |
Sbjct 32344 CAATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAA-GATTATGACGAG-GTTACA 32287
Query 6932 ATTGCAAACCATATTGACTATGAAAAGTGGAACAATCACCAAAGGAGAGAATCAAATGGA 6991
||||| ||||| ||||||||||||||||||||||| | || || ||||| ||||||
Sbjct 32286 ATTGCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGAT 32227
Query 6992 CCAACGTTTCGCGTGATGGGACAATTCTTGGGCTATCCATCTTTGATCGAAAAGACGCAT 7051
|| ||| ||| |||||| ||||||| || | || |||| | | | || |||
Sbjct 32226 CCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCAT 32167
Query 7052 GAGTTCTTCGAGAAAAGCCCGA-TATACTACAATGGCAGGCCGGATTTAATG 7102
||||||||| |||||| | | | || ||||| | || || || ||||||
Sbjct 32166 GAGTTCTTC-TCAAAAGCACTATTTTATTACAAGGATAGACCTGACTTAATG 32116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36828223260992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |