Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_011639.1
Length=13196
Score E
Sequences producing significant alignments: (Bits) Value
seq778 80.6 2e-11
>seq778
Length=78982
Score = 80.6 bits (88), Expect = 2e-11
Identities = 233/356 (65%), Gaps = 2/356 (1%)
Strand=Plus/Minus
Query 8399 TCATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAA 8458
|||||||| | | || || || || ||| |||||| | || | ||||| | | |
Sbjct 32513 TCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCCTGA 32454
Query 8459 TGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTG 8518
|| |||| | | |||| || || || | ||||||||| | || ||| | | || |
Sbjct 32453 TGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCACTTCG 32394
Query 8519 TTCCTCTATTCCATGGATTAACTATGGCTGATGATCTACAA-TCTGTTATAAAGAAGATG 8577
| || ||| | || |||||||||||||||||| ||||| | || | || || |||
Sbjct 32393 TCCCGTTATGCACAGGTTTAACTATGGCTGATGAT-TACAACACAGTGGTCAATAAAATG 32335
Query 8578 TTAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCAT 8637
| || ||| || ||| | | |||||||| | ||| |||| || || ||
Sbjct 32334 ATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAACCAC 32275
Query 8638 ATTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAA 8697
|||| |||||||| ||||| ||| | || || |||| ||||| || || ||
Sbjct 32274 GTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATTTTCC 32215
Query 8698 GTAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTT 8753
|| ||||| | | || || | || || || ||| |||| ||||| |||||
Sbjct 32214 GTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTT 32159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 42108122258864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |