Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_017685.1
Length=14717
Score E
Sequences producing significant alignments: (Bits) Value
seq778 145 7e-31
>seq778
Length=78982
Score = 145 bits (160), Expect = 7e-31
Identities = 226/323 (70%), Gaps = 0/323 (0%)
Strand=Plus/Minus
Query 9917 GAGATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAG 9976
||||||| || || ||||| ||||| ||||||| || ||| || || |||| || ||
Sbjct 32438 GAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCACTTCGTCCCGTTATGCACAG 32379
Query 9977 GATTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAAAG 10036
| ||||| ||||||||||| | || || || ||||| |||||| | ||| |||| |
Sbjct 32378 GTTTAACTATGGCTGATGATTACAACACAGTGGTCAATAAAATGATGCAAGCATCTTCTG 32319
Query 10037 GACAGGGCCTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGT 10096
| || | ||||| | ||| |||| || ||||| || | || ||||| ||||
Sbjct 32318 GTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAACCACGTTGACTATGAAAAGT 32259
Query 10097 GGAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGTCAATTTT 10156
|||| || ||||| ||| ||| | |||| || || || || ||||| |||| |
Sbjct 32258 GGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATTTTCCGTTATGGGAAAATTCT 32199
Query 10157 TGGGCTTACCTAATTTAATAGAAAGAACTCATGAGTTTTTTGAAAAAAGTCTTATTTATT 10216
| || || || ||||| | | ||||| |||||||| || |||| || ||||||
Sbjct 32198 TTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTTCTCAAAAGCACTATTTTATT 32139
Query 10217 ACAATGGGAGGCCTGACTTGATG 10239
|||| | || |||||||| |||
Sbjct 32138 ACAAGGATAGACCTGACTTAATG 32116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46975243921280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |