Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_017714.1
Length=15867
Score E
Sequences producing significant alignments: (Bits) Value
seq778 161 1e-35
>seq778
Length=78982
Score = 161 bits (178), Expect = 1e-35
Identities = 255/360 (71%), Gaps = 4/360 (1%)
Strand=Plus/Minus
Query 11015 TGGTAATTGGGTTAAAAGCAAAGGAAAGGGAATTGAAGGATGCAGGTAGATTCTTTTCAT 11074
|||| ||||| || | |||||||| ||||||||||| | |||| | |||||| |
Sbjct 32516 TGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCC 32457
Query 11075 TGATGAGTTGGGAGTTAAGAGAGTATTTTGTATTCACAGAGTATTTGATTAAAGAA-CAT 11133
|||||||||||| ||| |||| || || || | || ||||| ||||| |||||| ||
Sbjct 32456 TGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGAT-AAAGAAGCAC 32398
Query 11134 TTTGTGCCATTATTCAAAGGATTAACTATGGCAGATGATCTACAA-ACTGTAATTAAAAA 11192
|| || || |||| || ||| ||||||||||| |||||| ||||| || || | || ||
Sbjct 32397 TTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGAT-TACAACACAGTGGTCAATAA 32339
Query 11193 GATGATTGATGTATCAGCAGGACAAGGTACTGAAACCTATGAAAACATAACAATAGCGAA 11252
||||| | | ||| | || ||| || || ||||| | | ||||| || ||
Sbjct 32338 AATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAA 32279
Query 11253 TAATATTGACTATGAGAAGTGGAATAATTATCAAAGATATGATTCAAATAGTGCAATTTT 11312
| |||||||||| |||||||| |||||||| ||| || ||||| | | | ||
Sbjct 32278 CCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATT 32219
Query 11313 CACTGTCATGGGACAATTTTTAGGGTATCCAAAGTTAATAGCAAGAACTCATGAGTTTTT 11372
| || |||||| |||| || || | || || || | | ||||| |||||||| ||
Sbjct 32218 TTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTT 32159
Score = 84.2 bits (92), Expect = 2e-12
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 10777 TGGCATAGACTGCCATTGATTAAATGTTTTGATATTCCTGATATGATTGACCCCAGTATA 10836
||||||||||| |||||| | |||||||| || ||||| || ||||| ||||||| | |
Sbjct 32757 TGGCATAGACTTCCATTGTTGAAATGTTTCGAGATTCCAGACATGATAGACCCCACAACA 32698
Query 10837 ATATACAGTGATAAATCTCATTCTAT 10862
||||| ||| ||||||||||| ||
Sbjct 32697 ATATATTCTGACAAATCTCATTCAAT 32672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 50655184691680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |