Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_020804.1 Length=13298 Score E Sequences producing significant alignments: (Bits) Value seq778 78.8 8e-11 >seq778 Length=78982 Score = 78.8 bits (86), Expect = 8e-11 Identities = 121/169 (72%), Gaps = 3/169 (2%) Strand=Plus/Minus Query 8374 GATCTTGTTATAGGATTAAAACCCAAAGAGAGAGAAATGAAAAGAACTGGTCGttttttt 8433 || || || || ||||| | | || ||||| ||| ||||| | ||||| || ||| Sbjct 32520 GAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTT 32461 Query 8434 tCATTGATGACATGGAACTTACGGAATTATTTTGTCATGACTGAGTTATTAATTAAAGAA 8493 | |||||| ||| ||||| |||| || ||||| ||||||| || || |||||| Sbjct 32460 GCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGAT-AAAGAA 32402 Query 8494 -CACTTCATAGGACTATTCAACGGTTTAACCATGGCTGATGACTTACAA 8541 |||||| | ||| || |||||||| ||||||||||| |||||| Sbjct 32401 GCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGA-TTACAA 32354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42434517005456