Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_022755.1
Length=10692
Score E
Sequences producing significant alignments: (Bits) Value
seq778 122 6e-24
>seq778
Length=78982
Score = 122 bits (134), Expect = 6e-24
Identities = 264/388 (68%), Gaps = 8/388 (2%)
Strand=Plus/Minus
Query 5959 GCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAAATTA 6018
|||||||| | || |||||| | |||||||||||| | || ||| |||| ||||
Sbjct 32499 GCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCCTGATGAGTTGGGCATTA 32440
Query 6019 AGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCAC 6078
|||| |||||||| ||||| ||||| | ||||||| || || || || || | |||
Sbjct 32439 CGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCACTTCGTCCCGTT-ATGCAC 32381
Query 6079 -GGGCTCACCATGGCGGACGACCTGACA--GCTGTTATGAAGAAAATGATGGAGTCATCT 6135
|| | || ||||| || || | ||| | || | || ||||||||| | |||||
Sbjct 32380 AGGTTTAACTATGGCTGATGA--TTACAACACAGTGGTCAATAAAATGATGCAAGCATCT 32323
Query 6136 TCAGGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAACCATATTGACTATGAA 6195
|| || ||| | | || ||||| | || | ||||| ||||| |||||||||||
Sbjct 32322 TCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAACCACGTTGACTATGAA 32263
Query 6196 AAATGGAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAG 6255
|| ||||| || |||| | |||| | |||| ||| || || || ||||| |
Sbjct 32262 AAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATTTTCCGTTATGGGAAAA 32203
Query 6256 TTCCTAGGGTATCCAAATTTAATTTACCGGACGCATGAGTTTTTTGAGAATAGC-CTCAT 6314
||| | || | || ||||| || | || |||||| || || || ||| || |
Sbjct 32202 TTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAG-TTCTTCTCAAAAGCACTATT 32144
Query 6315 ATATTACAATAACAGACCCGACCTGATG 6342
|||||||| | ||||| ||| | |||
Sbjct 32143 TTATTACAAGGATAGACCTGACTTAATG 32116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 34098666006528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |