Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq778 129 4e-26 >seq778 Length=78982 Score = 129 bits (142), Expect = 4e-26 Identities = 247/364 (68%), Gaps = 0/364 (0%) Strand=Plus/Minus Query 6259 ATGATCTTGTCATAGGACTCAAAGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGATTCT 6318 |||| || ||||| ||| | | | || ||||| ||||| ||| | || | |||| Sbjct 32522 ATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCT 32463 Query 6319 TTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAGA 6378 || | ||||| ||| | |||| || || ||||| |||||||| ||||| |||| Sbjct 32462 TTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGA 32403 Query 6379 CGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATAA 6438 |||||| |||||| | | | ||| || || ||||| ||||| | | | ||| | | Sbjct 32402 AGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCA 32343 Query 6439 AGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCCATTTGTATAG 6498 | || |||||| | ||||||| || ||| | | | ||||||| || || | Sbjct 32342 ATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTG 32283 Query 6499 CCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAACGGGCCCG 6558 | ||||| |||||||||| |||||||||||| |||| ||| ||| | || | || | Sbjct 32282 CTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGG 32223 Query 6559 TGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGAACTCATGAAT 6618 | || || ||||| ||||||| |||| || | || ||| ||||| ||||| | Sbjct 32222 TATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGT 32163 Query 6619 TTTT 6622 | || Sbjct 32162 TCTT 32159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35516243806912