Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025255.1
Length=11135
Score E
Sequences producing significant alignments: (Bits) Value
seq778 129 4e-26
>seq778
Length=78982
Score = 129 bits (142), Expect = 4e-26
Identities = 247/364 (68%), Gaps = 0/364 (0%)
Strand=Plus/Minus
Query 6259 ATGATCTTGTCATAGGACTCAAAGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGATTCT 6318
|||| || ||||| ||| | | | || ||||| ||||| ||| | || | ||||
Sbjct 32522 ATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCT 32463
Query 6319 TTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAGA 6378
|| | ||||| ||| | |||| || || ||||| |||||||| ||||| ||||
Sbjct 32462 TTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGA 32403
Query 6379 CGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACAGCGGTGATAA 6438
|||||| |||||| | | | ||| || || ||||| ||||| | | | ||| | |
Sbjct 32402 AGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCA 32343
Query 6439 AGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCCATTTGTATAG 6498
| || |||||| | ||||||| || ||| | | | ||||||| || || |
Sbjct 32342 ATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTG 32283
Query 6499 CCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCGAACGGGCCCG 6558
| ||||| |||||||||| |||||||||||| |||| ||| ||| | || | || |
Sbjct 32282 CTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGG 32223
Query 6559 TGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGAACTCATGAAT 6618
| || || ||||| ||||||| |||| || | || ||| ||||| ||||| |
Sbjct 32222 TATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGT 32163
Query 6619 TTTT 6622
| ||
Sbjct 32162 TCTT 32159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35516243806912
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |