Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025341.1
Length=11139
Score E
Sequences producing significant alignments: (Bits) Value
seq778 125 5e-25
>seq778
Length=78982
Score = 125 bits (138), Expect = 5e-25
Identities = 337/505 (67%), Gaps = 18/505 (4%)
Strand=Plus/Minus
Query 6265 TGATCATCGGATTGAAAGGGAAAGAGAGAGAAGTGAAAGTAAAAGGACGGTTCTTTTCAC 6324
|| |||| ||||||| | || ||||| ||| ||||| ||||| ||||||||| | |
Sbjct 32516 TGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCC 32457
Query 6325 TCATGTCGTGGAAACTAAGAGAATATTTTGTTGTCACAGAATACCTAATCAAAGAA-CAT 6383
| ||| ||| | || |||| || || || | || || ||| | || |||||| ||
Sbjct 32456 TGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGAT-AAAGAAGCAC 32398
Query 6384 TTCGTCCCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAATATCAAAA 6443
|||||||| | | || || || |||||||| ||||| | ||| || | |||
Sbjct 32397 TTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCAATAAA 32338
Query 6444 CTAATGGATCGCA-CTCAGGGCCAAGGAGGAGAGGACTACACCCAAGTTTGCATTGCTAA 6502
| ||| | ||| || || ||| | | || || | | ||| ||||||||
Sbjct 32337 ATGATGCAA-GCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAA 32279
Query 6503 TCATATCGATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGGACCTGTGTT 6562
|| | || |||||||||||||||||| |||||||| |||| | || || ||
Sbjct 32278 CCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATT 32219
Query 6563 CATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACATGAGTTCTT 6622
|| |||||| ||||| ||||||| || || || | |||||| |||||||||||
Sbjct 32218 TTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTT 32159
Query 6623 -TGAATCTAGCTGGGTGTATTACAATGCTAGACCTGATTTAATGG---TCATCCGAGATG 6678
| || || | |||||||| | ||||||||| ||||||| ||| | |||||
Sbjct 32158 CTCAAAAGCACT-ATTTTATTACAAGGATAGACCTGACTTAATGGTGATCAACGGAGAT- 32101
Query 6679 GGAGATTAGAAAA---TCTAGGTCCTGAAATAGTTTGTTGGAATGGACAAGATGGGGGGT 6735
|| ||||||| | ||| || | |||| ||||| || || | || || |
Sbjct 32100 --AGTCTAGAAAACTTGCCAGG---GGAGTTTATTTGCTGGAAAGGCCAGGCCGGAGGAT 32046
Query 6736 TAGAAGGGCTACGACAGAAAGGATG 6760
|| ||||| ||||| ||||| ||
Sbjct 32045 GTGAGGGGCTTCGACAAAAAGGGTG 32021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35529043606464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |