Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025342.1
Length=11120
Score E
Sequences producing significant alignments: (Bits) Value
seq778 116 3e-22
>seq778
Length=78982
Score = 116 bits (128), Expect = 3e-22
Identities = 278/415 (67%), Gaps = 4/415 (1%)
Strand=Plus/Minus
Query 6233 TGCAAATGATCTCATCATTGGGTTAAAAGGGAAAGAGCGTGAAGTAAAAATTAAGGGACG 6292
||| ||||| || ||||||| || | | || ||| | ||| | ||| ||| || ||
Sbjct 32527 TGCCAATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCG 32468
Query 6293 ATTCTTCTCTTTGATGTCTTGGAGATTGAGGGAATATTTCGTTGTTACAGAATATCTTAT 6352
||||| | ||||| |||| ||| | || || ||||| | || || || | ||
Sbjct 32467 GTTCTTTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGAT 32408
Query 6353 AAAGGAGCATTTCGTCCCATTATTCAATGGGTTGACAATGGCAGATGACATGACGACAGT 6412
|||| |||| |||||||| |||| || || || || ||||| ||||| | |||||
Sbjct 32407 AAAGAAGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGT 32348
Query 6413 GATATCGAAATTGATGGACAGAACCCAAGGTCAGGGCGGAGAGGACTACACACAAATCTG 6472
| | ||| ||||| | | | ||||| | | | || || || | |
Sbjct 32347 GGTCAATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATG-ACGAGGTTA 32289
Query 6473 CA-TCGCCAATCACATTGACTATGAAAAATGGAACAATCATCAAAGAAAGGACGCCACCG 6531
|| | || || ||| ||||||||||||| ||||||||| |||| ||| || || | |
Sbjct 32288 CAATTGCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATG 32229
Query 6532 GCCCTGTCTTTAAGGTCATGGGACAGTTCTTGGGATTACCAAATTTAATCTATCGAACAC 6591
|| || ||| || |||||| | ||||| ||||| || ||||| | | |||| |
Sbjct 32228 ATCCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCC 32169
Query 6592 ATGAGTTCTT-TGAACAGAGCTGGATTTATTATAATGGTAGGCCTGATTTGATGG 6645
|||||||||| | || || || ||||||| || | ||| ||||| || ||||
Sbjct 32168 ATGAGTTCTTCTCAAAAGCACT-ATTTTATTACAAGGATAGACCTGACTTAATGG 32115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35468244558592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |