Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025356.1
Length=11097
Score E
Sequences producing significant alignments: (Bits) Value
seq778 125 5e-25
>seq778
Length=78982
Score = 125 bits (138), Expect = 5e-25
Identities = 306/454 (67%), Gaps = 10/454 (2%)
Strand=Plus/Minus
Query 6349 TTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTACTTAATA 6408
|||||| |||||||| ||| | | |||| || || ||||| || |||||||| |||
Sbjct 32466 TTCTTTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATA 32407
Query 6409 AAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACATCAGTT 6468
|||| || | || || |||| || ||| | || ||||| |||||| | ||||
Sbjct 32406 AAGAAGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTG 32347
Query 6469 GTAAAGAAGATGTTGGACAACA-CGAATGGACAAGGACTGGATGATTATTCATCGATTTG 6527
|| || || ||| || | | || | ||| ||| | |||||| | ||
Sbjct 32346 GTCAATAAAATGATGCA-AGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTAC 32288
Query 6528 CATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAATCCAATGG 6587
|| || || ||| | |||||||| |||||||| ||| |||||||| |||| | ||||
Sbjct 32287 AATTGCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGA 32228
Query 6588 GCCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCCCAGATTGTTTGAAAGAACCCA 6647
|| || ||| || ||||| | || || || | |||| ||||||| ||||||||
Sbjct 32227 TCCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCA 32168
Query 6648 TGAGTT-TTTTGAATCAAGC-CTCATTTACTACAACGGCAGACCAGACTTGATGGATGTA 6705
|||||| || | || |||| || |||| ||||| | ||||| ||||| |||| |
Sbjct 32167 TGAGTTCTTCTCAA--AAGCACTATTTTATTACAAGGATAGACCTGACTTAATGGTGATC 32110
Query 6706 AGAGGAGAT--TCGTTGATCAATACCACTGAAAAGTTGGTGTGTTGGGAGGGTCAGGCGG 6763
| |||||| || | || | | | | | |||| | || ||| | || ||||| |
Sbjct 32109 AACGGAGATAGTC-TAGAAAACTTGC-CAGGGGAGTTTATTTGCTGGAAAGGCCAGGCCG 32052
Query 6764 GAGGATTGGAAGGATTGAGACAAAAAGGATGGAG 6797
|||||| || || | |||||||||| || ||
Sbjct 32051 GAGGATGTGAGGGGCTTCGACAAAAAGGGTGAAG 32018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35394645711168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |