Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq778 111 1e-20 >seq778 Length=78982 Score = 111 bits (122), Expect = 1e-20 Identities = 243/364 (67%), Gaps = 0/364 (0%) Strand=Plus/Minus Query 7429 ATGCATTGATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttt 7488 ||| | || | ||||| |||| ||||| || || ||| |||||| ||| | || | Sbjct 32522 ATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCT 32463 Query 7489 tttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGA 7548 || | || ||| ||||| | | | || || || || ||||| |||||||| |||| Sbjct 32462 TTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGA 32403 Query 7549 AGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTA 7608 |||| || || || || | | ||| || ||||||||||||| | | || || | Sbjct 32402 AGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCA 32343 Query 7609 AGAAAATGTTGGAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTG 7668 | |||||| || | |||| || || | | |||||||| || | |||| Sbjct 32342 ATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTG 32283 Query 7669 CTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAG 7728 ||||||| || || ||||| ||||||||||| | || ||| || ||||| | | | Sbjct 32282 CTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGG 32223 Query 7729 TCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAAT 7788 | ||| || |||||| |||| || || | || |||||| | | | |||||||| | Sbjct 32222 TATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGT 32163 Query 7789 TTTT 7792 | || Sbjct 32162 TCTT 32159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39052188433152