Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025378.1
Length=11202
Score E
Sequences producing significant alignments: (Bits) Value
seq778 111 1e-20
>seq778
Length=78982
Score = 111 bits (122), Expect = 1e-20
Identities = 244/363 (67%), Gaps = 2/363 (1%)
Strand=Plus/Minus
Query 6329 GACCTTGTGATTGGACTTAAAGGGAAAG-AGAGAGAATTAAAATTGATTGGGCGTTTCTT 6387
|| || || |||||| || | || |||| |||| ||||| ||| | || || |||||
Sbjct 32520 GAACTGGTCATTGGA-TTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTT 32462
Query 6388 TTCTCTCATGTCTTGGAAATTGAGAGAATACTTCGTCATAACCGAGCACCTAATTAAGAC 6447
| | || ||| |||| ||| |||| |||||||||||||| ||| || | || ||||
Sbjct 32461 TGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAA 32402
Query 6448 TCACTTTGTCCCTCTGTTCCACGGACTTACGATGGCAGATGATCTCACATCAGTGATCAA 6507
||||| ||||| | | | || | || ||||| |||||| || ||||| ||||
Sbjct 32401 GCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCAA 32342
Query 6508 GAAGATGATGGACAGTTCCTCGGGGCAGGGGTTGACAGATTACTCAGCTGTATGCATAGC 6567
|| |||||| | || || || || |||||| | || || ||
Sbjct 32341 TAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGC 32282
Query 6568 CAATCATATCGACTACGAAAAATGGAACAATCACCAGCGGAAAGAATCCAATGGGCCGGT 6627
|| || | ||||| ||||| ||||||||| | ||| | |||| | |||| |||||
Sbjct 32281 TAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGT 32222
Query 6628 ATTCCGAGTAATGGGCCAATTCTTGGGCTTCCCCAATCTGATATCCAGAACGCACGAATT 6687
||| || ||||| ||||||| || || |||||| || | ||||| || || ||
Sbjct 32221 ATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTT 32162
Query 6688 CTT 6690
|||
Sbjct 32161 CTT 32159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35730640449408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |