Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025384.1
Length=11190
Score E
Sequences producing significant alignments: (Bits) Value
seq778 114 9e-22
>seq778
Length=78982
Score = 114 bits (126), Expect = 9e-22
Identities = 271/404 (67%), Gaps = 4/404 (1%)
Strand=Plus/Minus
Query 6266 CTGGTTATTGCCTTGAGGGTGAAAGAGAGAGAGATTAAGGACATCGGACGCTTCTTCGCG 6325
||||| |||| ||||||| || ||||| || | || | || || ||||| ||
Sbjct 32517 CTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCC 32458
Query 6326 CTCATGAGTTGGATGGTGCGGGAGTACTTTGTTATCACAGAATATCTCATCAAAGAGTTC 6385
|| ||||||||| | || || ||||| || || || || || | || || || |
Sbjct 32457 CTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCAC 32398
Query 6386 TACCTCCCCCTCTTCTCCGGACTCACCATGGCGGATGACTTCAACACAGTCACCGACAAA 6445
| | |||| | | | | || | || ||||| ||||| | ||||||||| | | |||
Sbjct 32397 TTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCAATAAA 32338
Query 6446 ATGCTGAAGTGCAGCGAC-GGACAAGGGACAAATGACTACAAAACTGTGACCATTGCCAA 6504
||| || | ||| | | || ||| ||| | || || | || || ||||| ||
Sbjct 32337 ATGATGCAA-GCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAA 32279
Query 6505 CCACCTGGACTACACTAAATGGAACAACCACCAGCGGGCAGAAGCAAACAATCCGGTATT 6564
|||| | ||||| || |||||||| | ||| | | ||||||||| ||||||||||
Sbjct 32278 CCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATT 32219
Query 6565 CAAAGTGATGGGGCAATTCCTGGGGTACCCCAATCTATTCACCAGGTCCCACGAGATCTT 6624
|| ||||| ||||| | || | |||||| | || || |||| ||| ||||
Sbjct 32218 TTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTT 32159
Query 6625 C-CAGAAGTCACTGATCTATTACAAGGACAGGCCGGACCTGATG 6667
| || ||| |||| | ||||||||||| || || ||| | |||
Sbjct 32158 CTCAAAAG-CACTATTTTATTACAAGGATAGACCTGACTTAATG 32116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35692241050752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |