Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_025405.1
Length=11124
Score E
Sequences producing significant alignments: (Bits) Value
seq778 154 1e-33
>seq778
Length=78982
Score = 154 bits (170), Expect = 1e-33
Identities = 350/513 (68%), Gaps = 19/513 (4%)
Strand=Plus/Minus
Query 6283 ATGATCTTATAATTGGATTGAGAGCAAAGGAGAGAGAGTTGAAGAACAAAGGACGATTCT 6342
|||| || | ||||||||||| ||||||||||| || ||||| ||||| || ||||
Sbjct 32522 ATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCT 32463
Query 6343 TTGCACTGATGTCTTGGAGACTTAGAGAATATTTTGTGGTCACAGAATATTTGATCAAAA 6402
|||| |||||| |||| | | |||| || || || | || || || ||||| || |
Sbjct 32462 TTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGA 32403
Query 6403 AGCATTACATCCCTTTGTTCAAAGGCTTGACCATGGCGGATGATCTAAATACAGTAATAG 6462
|||| | | |||| || | || ||| || || ||||| |||||| || ||||| |
Sbjct 32402 AGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCA 32343
Query 6463 AAAAGATGATTCAGAGCA-CAAGCGGTCATGATAGAGAAGATAGCCGAAGACTTGTCACC 6521
| || ||||| || |||| | ||||| | | ||||| || || || ||
Sbjct 32342 ATAAAATGATGCA-AGCATCTTCTGGTCAAACCACACAAGAT-TATGACGA--GGTTACA 32287
Query 6522 GTCTGC-AACCATTTGGATTATGAAAAATGGAACAACAATCAAAGGGATGAGTCAAACCA 6580
| ||| ||||| | || |||||||| |||||||| |||| || | || |||| |
Sbjct 32286 AT-TGCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGA 32228
Query 6581 TGCGGTATTCAAAGTGATGGGCCAATTTTTAGGATTTCCCAATTTGATAACTAGAACCCA 6640
| ||||||| || ||||| |||| || ||||| ||||||||| | |||||||||
Sbjct 32227 TCCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCA 32168
Query 6641 TGAGATATT-TCAGAAATCCCTTATTTATTTTGTAAATAGACCAGACCTCATGACAACCC 6699
|||| | || ||| ||| | || |||||| ||||||| ||| | ||| | |
Sbjct 32167 TGAGTTCTTCTCA-AAAGCACTATTTTATTACAAGGATAGACCTGACTTAATGGTGATC- 32110
Query 6700 AAAACGGAGAAATAATCAACAGAACAGAACA-ACGAG----TCTGCTGGCAAGGACAGGA 6754
||||||| ||| || | | ||| || ||| | |||||| |||| ||||
Sbjct 32109 --AACGGAG--ATAGTCTAGAAAACTTGCCAGGGGAGTTTATTTGCTGGAAAGGCCAGGC 32054
Query 6755 TGGAGGATTAGAAGGTTTAAGACAAAAAGGTTG 6787
||||||| || || | |||||||||| ||
Sbjct 32053 CGGAGGATGTGAGGGGCTTCGACAAAAAGGGTG 32021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35481044358144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |