Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_028230.1
Length=12020
Score E
Sequences producing significant alignments: (Bits) Value
seq778 120 2e-23
>seq778
Length=78982
Score = 120 bits (132), Expect = 2e-23
Identities = 247/362 (68%), Gaps = 4/362 (1%)
Strand=Plus/Minus
Query 7194 ATCGGATTAAAAGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGAtttttttCATTAATG 7253
|| ||||| | ||||| || ||||| ||||| | || | || ||| | | |||
Sbjct 32511 ATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCCTGATG 32452
Query 7254 TCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTATGTT 7313
||||| |||| |||| || || || ||||| || ||||||| || | | ||
Sbjct 32451 AGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCACTTCGTC 32392
Query 7314 CCATTATTCAAGGGATTGACAATGGCAGATGGATTA-ATGACAGTGGTGAAGAAAATGAT 7372
|| |||| || || || || ||||| |||| |||| | |||||||| || ||||||||
Sbjct 32391 CCGTTATGCACAGGTTTAACTATGGCTGATG-ATTACAACACAGTGGTCAATAAAATGAT 32333
Query 7373 TGATTCATCATGCGGGCAAGGAAATCTAGATTACAACACTGTATCAATTGCCAATCATAT 7432
| |||| | || ||| | | |||||| || || ||||||| || || |
Sbjct 32332 GCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAACCACGT 32273
Query 7433 AGATTATACAAAGTGGAACAATCACCAGAGAAG-GAAGTCCAATCACCCTGTTTTTACTG 7491
|| ||| ||||||||||||| | |||||| | |||| | ||| | || || ||| | |
Sbjct 32272 TGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAG-CAAATGATCCGGTATTTTCCG 32214
Query 7492 TGATGGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAGTTCTTCGAAA 7551
| |||||| | || || || | || || || | |||||| |||||||||||| ||
Sbjct 32213 TTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTTCTCAA 32154
Query 7552 AA 7553
||
Sbjct 32153 AA 32152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 38348199457792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |