Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_028234.1
Length=12162
Score E
Sequences producing significant alignments: (Bits) Value
seq778 149 5e-32
>seq778
Length=78982
Score = 149 bits (164), Expect = 5e-32
Identities = 247/354 (70%), Gaps = 2/354 (1%)
Strand=Plus/Minus
Query 7385 ATTGGATTAAAGGCCAAAGAAAGAGAACTGAAAAGGAAAGGTAGAtttttttCTCTAATG 7444
|||||||| | ||| || || || ||| ||||| |||||| | || ||| | || |||
Sbjct 32511 ATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCCTGATG 32452
Query 7445 ACTTGGAGATTGAGAGAATACTTTGTTGCAACTGAATTCCTGATTAAAAAACATTTTGTC 7504
| |||| ||| |||| ||||| || |||||| | | |||| || || || || |||
Sbjct 32451 AGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCACTTCGTC 32392
Query 7505 CCTCTATTTGAGGGACTAACTATGGCAGATGATTTGATCACAGTTGTGaaaaaaaTGATT 7564
|| ||| || |||||||||| ||||||| | |||||| || || ||||||||
Sbjct 32391 CCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCAATAAAATGATG 32332
Query 7565 CGAAACTCAAATGGACAAGGATTAAATGATTACAGTAGAA-TAACTATAGCAAATCATAT 7623
| | || ||| ||| | | ||||| | || | || || || || || |
Sbjct 32331 CAAGCATCTTCTGGTCAAACCACACAAGATTAT-GACGAGGTTACAATTGCTAACCACGT 32273
Query 7624 TGATTATGAAAAGTGGAATAATCATCAAAGAAAGGAATCAAATAAATATGTTTTTAAAGT 7683
||| |||||||||||||| ||| |||| ||| ||| ||||| | || ||| ||
Sbjct 32272 TGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATTTTCCGT 32213
Query 7684 TATGGGGCAATTCTTAGGTTATCCTAATTTAATTGTCAGAACCCATGAGTTTTT 7737
|||||| ||||||| || | || ||||| |||| |||||||||||||| ||
Sbjct 32212 TATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTT 32159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 38802592341888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |