Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_028235.1 Length=12994 Score E Sequences producing significant alignments: (Bits) Value seq778 78.8 8e-11 >seq778 Length=78982 Score = 78.8 bits (86), Expect = 8e-11 Identities = 131/186 (70%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 8436 GATAATTACGAGTATATATCAATTGCGAATCATATTGATTATGAAAAATGGAACAATCAT 8495 ||| || ||||| || ||||||| || || |||| |||||||| ||||||||| || Sbjct 32304 GATTATGACGAGGTTA---CAATTGCTAACCACGTTGACTATGAAAAGTGGAACAATTAT 32248 Query 8496 CAACGATACGAATCTAATTGTCATATTTTTAAAGTTATGGGTCAATGTTTTGGTCTTCCC 8555 || || ||| | ||| || | ||| |||||||| ||| ||||| | ||| Sbjct 32247 CAGAGAGGAGAAGCAAATGATCCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCC 32188 Query 8556 AATTTGTTTTTACGTTCTCATGAATTTTTTCAAAAAAGC-CTGATTTATTACAACCAACG 8614 ||||||||| | | | |||| | || ||| |||||| || |||||||||| | | Sbjct 32187 AATTTGTTTGTTAGAACCCATG-AGTTCTTCTCAAAAGCACTATTTTATTACAAGGATAG 32129 Query 8615 ACCTGA 8620 |||||| Sbjct 32128 ACCTGA 32123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41464950648704