Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_028236.1 Length=11072 Score E Sequences producing significant alignments: (Bits) Value seq778 98.7 7e-17 >seq778 Length=78982 Score = 98.7 bits (108), Expect = 7e-17 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 6213 CCGATGATCTGATCATCGGATTAAAGGGTAAGGAGAGAGAAGTCAAAGTAAAAGGAAGAT 6272 || |||| ||| |||| ||||| | || |||||||| ||| | ||| ||||| | | Sbjct 32525 CCAATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGT 32466 Query 6273 TCTTTTCCCTGATGTCTTGGAAGCTGAGAGAGTATTTCGTGGTGACGGAGTACTTGATAA 6332 ||||| |||||||| |||| | |||| || ||||| | || ||||||||||||| Sbjct 32465 TCTTTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAA 32406 Query 6333 AGGAGCATTACGTTCCTTTATTTAATGGGCTGACAATGGCTGATGACATGACAACA 6388 || |||| | ||| || |||| | || | || |||||||||| || |||||| Sbjct 32405 AGAAGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATG--ATTACAACA 32352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35314646963968