Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_028239.1
Length=16133
Score E
Sequences producing significant alignments: (Bits) Value
seq778 163 3e-36
>seq778
Length=78982
Score = 163 bits (180), Expect = 3e-36
Identities = 280/401 (70%), Gaps = 4/401 (1%)
Strand=Plus/Minus
Query 11285 GTAATTGGTCTTAAGGCTAAAGAGAGGGAATTGAAAGATGCTGGGAGGtttttttCATTA 11344
|| ||||| | | ||| || ||||||||||||||| | || |||| ||| | |
Sbjct 32514 GTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTAAAGGTCGGTTCTTTGCCCTG 32455
Query 11345 ATGAGCTGGGAGCTGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTT 11404
||||| |||| | | || |||||||| | ||||| ||| | || || |||| ||
Sbjct 32454 ATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAAGCACTTC 32395
Query 11405 GTACCATTATTTAAGGGTCTGACTATGGCTGATGACTTACAA-ACAGTTATTAAGAAGAT 11463
|| || |||| | ||| | |||||||||||||| |||||| ||||| | || || ||
Sbjct 32394 GTCCCGTTATGCACAGGTTTAACTATGGCTGATGA-TTACAACACAGTGGTCAATAAAAT 32336
Query 11464 GATAGATGTGTCTTCTGGTCAAGGCACTGAGACATATGAGAATATCACCATTGCAAATAA 11523
||| | | |||||||||||| ||| | ||||| | | || ||||| || |
Sbjct 32335 GATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGCTAACCA 32276
Query 11524 CATAGATTATGAGAAATGGAATAATTATCAAAGGTATGAATCTAATCATGCAATATTCAC 11583
| | || ||||| || ||||| |||||||| || ||| | ||| || | |||| |
Sbjct 32275 CGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGTATTTTC 32216
Query 11584 AGTGATGGGGCAATTTTTAGGGTATCCAAAGTTAATTGCAAGAACTCATGAGTTTTTTGA 11643
|| ||||| |||| || || | || || || ||| ||||| |||||||| ||
Sbjct 32215 CGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTTCTTCTC 32156
Query 11644 GAAAAGC-CTAGTTTATTATAACCAAAGACCTGACTTAATG 11683
|||||| ||| ||||||| || | |||||||||||||||
Sbjct 32155 -AAAAGCACTATTTTATTACAAGGATAGACCTGACTTAATG 32116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 51506370991616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |