Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_028246.1
Length=14627
Score E
Sequences producing significant alignments: (Bits) Value
seq778 178 1e-40
>seq778
Length=78982
Score = 178 bits (196), Expect = 1e-40
Identities = 349/509 (69%), Gaps = 14/509 (3%)
Strand=Plus/Minus
Query 9751 AACTGGTAATAGGACTAAAAGCTAAAGAGAGAGAATT-AAAGATAGAAGGTAGAtttttt 9809
||||||| || ||| | | || || ||||| ||||| ||| || ||||| | || |||
Sbjct 32519 AACTGGTCATTGGATTGAGGGCAAAGGAGAGGGAATTGAAACCTA-AAGGTCGGTTCTTT 32461
Query 9810 tCATTGATGTCATATGACATGAGG-GATTACTTCGTAATGACTGAATATTTGATaaaaaa 9868
| ||||| | | ||| | | ||||||||||| || ||||| || |||||||| ||
Sbjct 32460 GCCCTGATGAGTTGGG-CATTACGAGATTACTTCGTCATAACTGAGTACTTGATAAAGAA 32402
Query 9869 aTATTATGTACCATTATTCAAAGGATTGACCATGGCTGATGATCAAAATACAGTAGTAAA 9928
| | || || |||| || ||| || || |||||||||||| | || ||||| || ||
Sbjct 32401 GCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTACAACACAGTGGTCAA 32342
Query 9929 GAAAATGCTCAAAGTTTCTAAAGGTCAAGGGCTAACAGATTATAAAGAGATAACATTTGC 9988
|||||| | ||| ||| |||||| | ||||||| | ||| | ||| ||||
Sbjct 32341 TAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGACGAGGTTACAATTGC 32282
Query 9989 TAATCACTTGGATTATGAGAAGTGGAATAATTATCAAAGGAGGGAATCAAACGGTCCGGT 10048
||| ||| | || ||||| |||||||| |||||||| || | ||| |||| | ||||||
Sbjct 32281 TAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAAGCAAATGATCCGGT 32222
Query 10049 GTTCAGAGTAATGGGCCAGTTTTTAGGTCTACCTCACTTAATAGAAAGAACTCACGAGTT 10108
|| || ||||| | || || || | || | || | | ||||| || |||||
Sbjct 32221 ATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTTAGAACCCATGAGTT 32162
Query 10109 CTTTGAAAATAGTCTAATTTATTACAATGGCCGACCTGATTTAATGTATGTCA---GAAA 10165
||| ||| ||| |||||||||| | ||||||| |||||| ||| || |
Sbjct 32161 CTTCTCAAAAGCACTATTTTATTACAAGGATAGACCTGACTTAATGGTGATCAACGGAGA 32102
Query 10166 TAAAGTTGTACACT--CCAAAGGTGATGACATCGTTTGCTGGGAAGGACAAAAAGGAGGA 10223
|| | | | ||| ||| || | | | |||||||| |||| || ||||||
Sbjct 32101 TAGTCTAGAAAACTTGCCAGGGGAGTTTA-----TTTGCTGGAAAGGCCAGGCCGGAGGA 32047
Query 10224 TTAGAGGGTCTAAGACAAAAAGGATGGAG 10252
| ||||| || |||||||||| || ||
Sbjct 32046 TGTGAGGGGCTTCGACAAAAAGGGTGAAG 32018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46687248556640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |