Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28] 1,392 sequences; 225,223,604 total letters Query= NC_031215.1 Length=12291 Score E Sequences producing significant alignments: (Bits) Value seq778 161 8e-36 >seq778 Length=78982 Score = 161 bits (178), Expect = 8e-36 Identities = 277/398 (70%), Gaps = 3/398 (1%) Strand=Plus/Minus Query 7282 ATAGATGAGGAGGGGCTGGATCTCAATGCTCTGATTATCGGGTTGAAAGAGAAGGAGAGA 7341 ||| |||| | |||||| | ||||| ||| | || || |||| | |||||||| Sbjct 32547 ATAAATGATGTGGGGCTCAGTGCCAATGAACTGGTCATTGGATTGAGGGCAAAGGAGAGG 32488 Query 7342 GAGATCAAAATTAACGGTCGTTTTTTCTCTCTGATGTCATGGGATTTGAGAGATTACTTT 7401 || | ||| ||| ||||| || || | |||||| |||| || |||||||||| Sbjct 32487 GAATTGAAACCTAAAGGTCGGTTCTTTGCCCTGATGAGTTGGGCATTACGAGATTACTTC 32428 Query 7402 GTGATAACTGAATATCTAATCAAGACACATTTTGTCCCTCTTTTCTATGGTCTAACTATG 7461 || |||||||| || | || |||| || || ||||| | | | ||| |||||||| Sbjct 32427 GTCATAACTGAGTACTTGATAAAGAAGCACTTCGTCCCGTTATGCACAGGTTTAACTATG 32368 Query 7462 GCCGATGATATGACGACCGTTGTGAGGAAGATGATGGA-GAATACTAGCGGTCAGGGCTC 7520 || |||||| | || || || | || |||||| | | || || ||||| | | Sbjct 32367 GCTGATGATTACAACACAGTGGTCAATAAAATGATGCAAGCAT-CTTCTGGTCAAACCAC 32309 Query 7521 TGATGATTATGAACACATCGGAATTGCAAACCACCTTGATTACGAAAAATGGAACAACCA 7580 | |||||||| | | |||||| |||||| |||| || ||||| |||||||| | Sbjct 32308 ACAAGATTATGACGAGGTTACAATTGCTAACCACGTTGACTATGAAAAGTGGAACAATTA 32249 Query 7581 TCAGAGATATCAGTCCACTGAGCCGGTATTTACGGTGATGGGAAAGTTTTTGGGTTATCC 7640 ||||||| | | | ||| ||||||||| | || |||||||| || || || | || Sbjct 32248 TCAGAGAGGAGAAGCAAATGATCCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCC 32189 Query 7641 TAATTTGATTGCCAGGACCCATGAGTTCTT-TGAAAAG 7677 |||||| ||| || |||||||||||||| | ||||| Sbjct 32188 CAATTTGTTTGTTAGAACCCATGAGTTCTTCTCAAAAG 32151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39215385877440