Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_031278.1
Length=12247
Score E
Sequences producing significant alignments: (Bits) Value
seq778 132 4e-27
>seq778
Length=78982
Score = 132 bits (146), Expect = 4e-27
Identities = 370/557 (66%), Gaps = 13/557 (2%)
Strand=Plus/Minus
Query 7341 AATGGCCGATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAG 7400
|| || || |||||| | |||||| |||| ||||||||||| || || ||||| |||
Sbjct 32475 AAAGGTCGGTTCTTTGCCCTGATGAGTTGGGCATTACGAGATTACTTCGTCATAACTGAG 32416
Query 7401 TATCTGATTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATG 7460
|| |||| || | || || || || | | || | || ||||||||||||
Sbjct 32415 TACTTGATAAAGAAGCACTTCGTCCCGTTATGCACAGGTTTAACTATGGCTGATGATTAC 32356
Query 7461 ACAACAGTAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAG 7520
| ||||| || || |||||| || | ||| || | | ||||||||
Sbjct 32355 AACACAGTGGTCAATAAAATGATGCAAGCATCTTCTGGTCAAACCACACAAGATTATGAC 32296
Query 7521 CACATAGGAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAA 7580
| | |||||| || ||| | || |||||||||||||| ||| | || ||| ||
Sbjct 32295 GAGGTTACAATTGCTAACCACGTTGACTATGAAAAGTGGAACAATTATCAGAGAGGAGAA 32236
Query 7581 TCTACAGAACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCG 7640
| | || || ||||| | || ||||| |||||| | |||| || ||||| |||
Sbjct 32235 GCAAATGATCCGGTATTTTCCGTTATGGGAAAATTCTTTGGATTGCCCAATTTGTTTGTT 32176
Query 7641 AGAACTCATGAGTTCTTCGAGAAAAGC-TTCATTTACCACGGCGGTAGAGCAGACTTAAT 7699
||||| |||||||||||| |||||| | |||| || | |||| | ||||||||
Sbjct 32175 AGAACCCATGAGTTCTTC-TCAAAAGCACTATTTTATTACAAGGATAGACCTGACTTAAT 32117
Query 7700 GAAGATCTCCAACGGCAACATAGT-TAACAAGGATCCCA-GTAAGATGGTATGCTGGCAG 7757
| ||| |||||| | ||||| || || | ||| | || | | |||||| |
Sbjct 32116 GGTGAT---CAACGG--AGATAGTCTAGAAAACTTGCCAGGGGAGTTTATTTGCTGGAAA 32062
Query 7758 GGCCAGAAGGGCGGATTGGAAGGACTTCGACAAAAGGGGTGGAGCATATTGAATCTATTA 7817
|||||| || |||| || || ||||||||||| ||||| ||| | | ||| || |
Sbjct 32061 GGCCAGGCCGGAGGATGTGAGGGGCTTCGACAAAAAGGGTGAAGCTTGGTCAAT-TACTT 32003
Query 7818 GTCATTCGA--AGGGAAGGACAAGACCGGAACACCCGAATCCGATGCTTAGCTCAAGGAG 7875
| | || || |||| | ||| || || || | ||||| | ||| ||||| |
Sbjct 32002 GGCCTT-GATGAGGGCATCCAAAGCACGAAATACTAGGATCCGGTATTTAATGCAAGGTG 31944
Query 7876 ATAATCAGGTTATCTGT 7892
||||||| || || |||
Sbjct 31943 ATAATCAAGTCATATGT 31927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39074588082368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |