Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_031690.1
Length=11308
Score E
Sequences producing significant alignments: (Bits) Value
seq778 116 3e-22
>seq778
Length=78982
Score = 116 bits (128), Expect = 3e-22
Identities = 229/339 (68%), Gaps = 0/339 (0%)
Strand=Plus/Plus
Query 4478 TCAGGTCTATCCAGGTAATATATCAGTGATTTTTCAAAGAATTCATGAGTTCGAGATATT 4537
|||||||||||| |||||| | |||| |||| ||||| ||||| |||| | |
Sbjct 32123 TCAGGTCTATCCTTGTAATAAAATAGTGCTTTTGAGAAGAACTCATGGGTTCTAACAAAC 32182
Query 4538 AGTTTTGGATACCCAAGAAACTTTCCCATCACATCAAATACAGGATTATTGGCTTTGGCT 4597
| || || | |||| || |||||||| || |||||| |||| ||| |||| ||
Sbjct 32183 AAATTGGGCAATCCAAAGAATTTTCCCATAACGGAAAATACCGGATCATTTGCTTCTCCT 32242
Query 4598 CGTTGATGGTTATTCCATTTGCTATAATCAAAGTGATTGGCGATACAGATGTTCTCGTAC 4657
| |||| || ||||| || ||| |||| ||| || || || | | || ||
Sbjct 32243 CTCTGATAATTGTTCCACTTTTCATAGTCAACGTGGTTAGCAATTGTAACCTCGTCATAA 32302
Query 4658 CCTTCACTTCCTTGACCTGAAGTTGTATCCATCATTTTCTTTATGACGGTAGTCATATCA 4717
||| | |||||| |||| || | ||||||||| || | || || | ||||
Sbjct 32303 TCTTGTGTGGTTTGACCAGAAGATGCTTGCATCATTTTATTGACCACTGTGTTGTAATCA 32362
Query 4718 TCTGCCATAGTTAGTCCTTTAAACAATGGAACAAAGTGAGTCTTGATTAGGTGTTCTGTT 4777
|| |||||||||| ||| | | || || || ||||| |||| || | || || |||
Sbjct 32363 TCAGCCATAGTTAAACCTGTGCATAACGGGACGAAGTGCTTCTTTATCAAGTACTCAGTT 32422
Query 4778 ATTACAAAATACTCTCGTAAAGCCCAGGTCAATAGAGCA 4816
|| || || || |||||||| ||||| ||| || |||
Sbjct 32423 ATGACGAAGTAATCTCGTAATGCCCAACTCATCAGGGCA 32461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36069835137536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |