Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20funestus_20[genbank_20GCA_5F000349085.1_202013-03-28]
1,392 sequences; 225,223,604 total letters
Query= NC_031691.1
Length=11238
Score E
Sequences producing significant alignments: (Bits) Value
seq778 168 5e-38
>seq778
Length=78982
Score = 168 bits (186), Expect = 5e-38
Identities = 349/510 (68%), Gaps = 16/510 (3%)
Strand=Plus/Plus
Query 4337 CTCCATCCTTTTTGCCTAAGCCCCTCTAGTCCACCAGATTGCCCCGACCAGCAGA----C 4392
|| || |||||||| | ||||||||| ||| || | || || |||||| | |
Sbjct 32018 CTTCACCCTTTTTGTCGAAGCCCCTCACATCCTCCGGCCTGGCCTTTCCAGCAAATAAAC 32077
Query 4393 TCTA-TGTCCCCTTTTATTAACTATCTGTCCATCGATAATCTCCATCAGATCTGGTCTTT 4451
|| || | |||| | ||||||| || | ||| |||| | || ||||| |
Sbjct 32078 TCCCCTGGCAAGTTTTCTAGACTATCTC-----CGTTGATCACCATTAAGTCAGGTCTAT 32132
Query 4452 GATTGTAATAAATCAGACTCTGTTCA-AAGAATTCATGGGTTCTAGATATTAAGTTGGGG 4510
|||||||||| || || || | ||||| |||||||||||| | || |||||
Sbjct 32133 CCTTGTAATAAAATAGTG-CTTTTGAGAAGAACTCATGGGTTCTAACAAACAAATTGGGC 32191
Query 4511 TATCCCAAAAATTGTCCCATTACCTTGAATGTGGGATTATTGGCTGCTCCCCTCTGATGA 4570
|||| || |||| |||||| || ||| |||| ||| ||| |||| ||||||| |
Sbjct 32192 AATCCAAAGAATTTTCCCATAACGGAAAATACCGGATCATTTGCTTCTCCTCTCTGATAA 32251
Query 4571 TTGTTCCATTTTTCATAATCTACATGGTTGGCAAAGCTTACATGATCATAATTATCCGTA 4630
|||||||| |||||||| || || ||||| |||| | || | ||||||| | ||
Sbjct 32252 TTGTTCCACTTTTCATAGTCAACGTGGTTAGCAATTGTAACCTCGTCATAATCTTGTGTG 32311
Query 4631 CCTTGACCATATG-TGTTGTCCATTAATTTTTTAGTCAAAACGGTGGAGTTATCTGCCAT 4689
||||||| | | || | | ||| | ||| || || | || | | ||| |||||
Sbjct 32312 GTTTGACCAGAAGATGCT-TGCATCATTTTATTGACCACTGTGTTGTAATCATCAGCCAT 32370
Query 4690 GGTTAGACCTTTAAATAATGGGACAAAATGCTTCTTGATCAGATATTCTGTTATTACGAA 4749
|||| |||| | |||| ||||| || |||||||| |||| || || ||||| |||||
Sbjct 32371 AGTTAAACCTGTGCATAACGGGACGAAGTGCTTCTTTATCAAGTACTCAGTTATGACGAA 32430
Query 4750 GTATTCTCTCAACTCCCAGGACATGAGCGCAAAAAATCTTCCTTTTATTTTCAGTTCACG 4809
||| |||| || |||| ||| || ||||| || | ||||| ||||| ||| |
Sbjct 32431 GTAATCTCGTAATGCCCAACTCATCAGGGCAAAGAACCGACCTTTAGGTTTCAATTCCCT 32490
Query 4810 CT-CTTTGCCTTTAAGTCCGATAAGAAGTT 4838
|| ||||||| | || ||| || | ||||
Sbjct 32491 CTCCTTTGCCCTCAA-TCCAATGACCAGTT 32519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35845838645376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |