Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_001560.1 Length=11161 Score E Sequences producing significant alignments: (Bits) Value seq1440 91.5 1e-14 >seq1440 Length=90230 Score = 91.5 bits (100), Expect = 1e-14 Identities = 342/519 (66%), Gaps = 33/519 (6%) Strand=Plus/Plus Query 6294 ATGATCTAATTATTGGTCTTAAAGGAAAGGAGAGGGAACTGAAGTTGGCAGGTAGATTTT 6353 |||| || | || ||||| | || ||| || || ||||| | ||| ||||||| Sbjct 51975 ATGAATTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 52031 Query 6354 TCTCCCTAATGTCTTGGAAATTGCGAGAATACTTTGTAATTACCGAATATTTGATAAAGA 6413 | | || ||| |||| | || || |||||||| || || || |||||||| |||| Sbjct 52032 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 52091 Query 6414 CTCATTTCGTCCCTATGTTTAAAGGCCTGACAATGGCGGACGATCTA----ACTGCAGTC 6469 ||||| || ||| | | || ||| | |||||||| ||||| ||| || | |||| Sbjct 52092 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTC 52150 Query 6470 ATTAAAAAGATGTTAGATTCCTCATCCGGCCA-AGGATTGA-AGTCAT-ATGAGGCAATT 6526 | || | |||| || ||| ||| || || | | | | ||| || |||||| | Sbjct 52151 AACAAGATGATGCAAGCTTC---ATCTGGACAGACCACTCACAGTTATGATGAGGTGAC- 52206 Query 6527 TGCATAGCCAATCACATTGATTACGAAAAATGGAATAACCACCAAAGGAAGTTATC-AAA 6585 |||||| ||||| ||||||| || || ||||| || | ||||| | || | ||| Sbjct 52207 --CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAG-AGGTGAGGGAAA 52263 Query 6586 CGGCCCAGTGTTCCGAGTTATGGGCCAGTTCTTAGGTTATCCATCCTTAATCGAGAGAAC 6645 | || || ||| ||| ||||| | || || || | || || | |||||| Sbjct 52264 TGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAAC 52323 Query 6646 TCATGAATTTTTTGAGAAA--AGTCTTATATACTACAATGGAAGACCAGACTTGATGCGT 6703 |||||||| ||| | | | |||| ||| ||||| | ||||||| || ||| | Sbjct 52324 ACATGAATTCTTTCGGGATTCATTCTTCTAT--TACAAAGATCGACCAGATTTAATGGTT 52381 Query 6704 GTTCACAACAACACACTGATCAATTCAACCTCCCAACG-AGTTTGT----TGGCAAGGAC 6758 | | || | ||| | |||| | ||| |||| | ||||||| |||||||| | Sbjct 52382 AT--AGAAGGAGACAGT-ATCACT--AACAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCC 52436 Query 6759 AAGAGGGTGGACTGGAAGGTCTACGGCAAAAAGGATGGA 6797 ||| ||||| ||||| |||| || ||||| |||| Sbjct 52437 AAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGTTGGA 52475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35579738705000