Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_002526.1
Length=14900
Score E
Sequences producing significant alignments: (Bits) Value
seq9517 134 1e-27
seq8251 134 1e-27
seq1814 134 1e-27
seq1440 134 1e-27
>seq9517
Length=2557
Score = 134 bits (148), Expect = 1e-27
Identities = 218/314 (69%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165
||||| |||||| ||||||||| || || || || | ||||| || | | | ||||
Sbjct 639 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 698
Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225
|| ||||||||||| ||| || || || |||| || ||| | | | || |||
Sbjct 699 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 758
Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285
||| || | ||||| | || || || ||| || |||||||||| || |||
Sbjct 759 CAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGG 818
Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345
|| || ||||||||| ||| |||| ||||| ||| | || ||||| ||||||||
Sbjct 819 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 878
Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405
|| || |||||||||||||| ||||| ||||| || || | | || ||||||||
Sbjct 879 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 938
Query 10406 AACCAAAGACCAGA 10419
|| | |||||||
Sbjct 939 AAAGATCGACCAGA 952
>seq8251
Length=2688
Score = 134 bits (148), Expect = 1e-27
Identities = 218/314 (69%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165
||||| |||||| ||||||||| || || || || | ||||| || | | | ||||
Sbjct 314 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 373
Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225
|| ||||||||||| ||| || || || |||| || ||| | | | || |||
Sbjct 374 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 433
Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285
||| || | ||||| | || || || ||| || |||||||||| || |||
Sbjct 434 CAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGG 493
Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345
|| || ||||||||| ||| |||| ||||| ||| | || ||||| ||||||||
Sbjct 494 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 553
Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405
|| || |||||||||||||| ||||| ||||| || || | | || ||||||||
Sbjct 554 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 613
Query 10406 AACCAAAGACCAGA 10419
|| | |||||||
Sbjct 614 AAAGATCGACCAGA 627
>seq1814
Length=63972
Score = 134 bits (148), Expect = 1e-27
Identities = 218/314 (69%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165
||||| |||||| ||||||||| || || || || | ||||| || | | | ||||
Sbjct 1720 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1779
Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225
|| ||||||||||| ||| || || || |||| || ||| | | | || |||
Sbjct 1780 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1839
Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285
||| || | ||||| | || || || ||| || |||||||||| || |||
Sbjct 1840 CAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGG 1899
Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345
|| || ||||||||| ||| |||| ||||| ||| | || ||||| ||||||||
Sbjct 1900 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 1959
Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405
|| || |||||||||||||| ||||| ||||| || || | | || ||||||||
Sbjct 1960 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 2019
Query 10406 AACCAAAGACCAGA 10419
|| | |||||||
Sbjct 2020 AAAGATCGACCAGA 2033
>seq1440
Length=90230
Score = 134 bits (148), Expect = 1e-27
Identities = 218/314 (69%), Gaps = 0/314 (0%)
Strand=Plus/Plus
Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165
||||| |||||| ||||||||| || || || || | ||||| || | | | ||||
Sbjct 52058 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 52117
Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225
|| ||||||||||| ||| || || || |||| || ||| | | | || |||
Sbjct 52118 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 52177
Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285
||| || ||||| | | || || || ||| || |||||||||| || |||
Sbjct 52178 CAGACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGG 52237
Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345
|| || ||||||||| ||| |||| ||||| ||| | || ||||| ||||||||
Sbjct 52238 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 52297
Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405
|| || |||||||||||||| ||||| ||||| || || | | || ||||||||
Sbjct 52298 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 52357
Query 10406 AACCAAAGACCAGA 10419
|| | |||||||
Sbjct 52358 AAAGATCGACCAGA 52371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47533778990710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |