Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq9517 134 1e-27 seq8251 134 1e-27 seq1814 134 1e-27 seq1440 134 1e-27 >seq9517 Length=2557 Score = 134 bits (148), Expect = 1e-27 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165 ||||| |||||| ||||||||| || || || || | ||||| || | | | |||| Sbjct 639 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 698 Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225 || ||||||||||| ||| || || || |||| || ||| | | | || ||| Sbjct 699 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 758 Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285 ||| || | ||||| | || || || ||| || |||||||||| || ||| Sbjct 759 CAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGG 818 Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345 || || ||||||||| ||| |||| ||||| ||| | || ||||| |||||||| Sbjct 819 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 878 Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405 || || |||||||||||||| ||||| ||||| || || | | || |||||||| Sbjct 879 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 938 Query 10406 AACCAAAGACCAGA 10419 || | ||||||| Sbjct 939 AAAGATCGACCAGA 952 >seq8251 Length=2688 Score = 134 bits (148), Expect = 1e-27 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165 ||||| |||||| ||||||||| || || || || | ||||| || | | | |||| Sbjct 314 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 373 Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225 || ||||||||||| ||| || || || |||| || ||| | | | || ||| Sbjct 374 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 433 Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285 ||| || | ||||| | || || || ||| || |||||||||| || ||| Sbjct 434 CAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGG 493 Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345 || || ||||||||| ||| |||| ||||| ||| | || ||||| |||||||| Sbjct 494 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 553 Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405 || || |||||||||||||| ||||| ||||| || || | | || |||||||| Sbjct 554 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 613 Query 10406 AACCAAAGACCAGA 10419 || | ||||||| Sbjct 614 AAAGATCGACCAGA 627 >seq1814 Length=63972 Score = 134 bits (148), Expect = 1e-27 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165 ||||| |||||| ||||||||| || || || || | ||||| || | | | |||| Sbjct 1720 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1779 Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225 || ||||||||||| ||| || || || |||| || ||| | | | || ||| Sbjct 1780 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1839 Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285 ||| || | ||||| | || || || ||| || |||||||||| || ||| Sbjct 1840 CAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGG 1899 Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345 || || ||||||||| ||| |||| ||||| ||| | || ||||| |||||||| Sbjct 1900 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 1959 Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405 || || |||||||||||||| ||||| ||||| || || | | || |||||||| Sbjct 1960 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 2019 Query 10406 AACCAAAGACCAGA 10419 || | ||||||| Sbjct 2020 AAAGATCGACCAGA 2033 >seq1440 Length=90230 Score = 134 bits (148), Expect = 1e-27 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 10106 GATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGA 10165 ||||| |||||| ||||||||| || || || || | ||||| || | | | |||| Sbjct 52058 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 52117 Query 10166 TTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGT 10225 || ||||||||||| ||| || || || |||| || ||| | | | || ||| Sbjct 52118 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 52177 Query 10226 CAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAAATGG 10285 ||| || ||||| | | || || || ||| || |||||||||| || ||| Sbjct 52178 CAGACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGG 52237 Query 10286 AATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTA 10345 || || ||||||||| ||| |||| ||||| ||| | || ||||| |||||||| Sbjct 52238 AACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTT 52297 Query 10346 GGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTAC 10405 || || |||||||||||||| ||||| ||||| || || | | || |||||||| Sbjct 52298 GGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATTAC 52357 Query 10406 AACCAAAGACCAGA 10419 || | ||||||| Sbjct 52358 AAAGATCGACCAGA 52371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47533778990710