Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_011639.1
Length=13196
Score E
Sequences producing significant alignments: (Bits) Value
seq9517 113 4e-21
seq1440 113 4e-21
seq8251 107 2e-19
seq1814 107 2e-19
>seq9517
Length=2557
Score = 113 bits (124), Expect = 4e-21
Identities = 242/356 (68%), Gaps = 7/356 (2%)
Strand=Plus/Plus
Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460
|| || || | ||| |||||| || |||||| | |||||||| || || | |||
Sbjct 567 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 623
Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520
||| || | || || ||||| | || ||||| | |||||| | ||||||||
Sbjct 624 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 683
Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578
||||| | | || |||||||| |||||||| || |||||| | || | || ||||||
Sbjct 684 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTACAACACCGTAGTCAACAAGATGA 741
Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638
| || ||| || || || | |||||| | | | ||||||||||||
Sbjct 742 TGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATG 801
Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698
|||||||||| || ||||| ||| | ||||| || |||| || || ||| ||
Sbjct 802 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 861
Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754
| ||||| | | ||| || | || || || ||||| |||||||||||||||||
Sbjct 862 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917
>seq1440
Length=90230
Score = 113 bits (124), Expect = 4e-21
Identities = 242/356 (68%), Gaps = 7/356 (2%)
Strand=Plus/Plus
Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460
|| || || | ||| |||||| || |||||| | |||||||| || || | |||
Sbjct 51986 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 52042
Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520
||| || | || || ||||| | || ||||| | |||||| | ||||||||
Sbjct 52043 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 52102
Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578
||||| | | || |||||||| |||||||| || ||| || | || | || ||||||
Sbjct 52103 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAGATGA 52160
Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638
| || ||| || || || | |||||| | || | ||||||||||||
Sbjct 52161 TGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATG 52220
Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698
|||||||||| || ||||| ||| | ||||| || |||| || || ||| ||
Sbjct 52221 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 52280
Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754
| ||||| | | ||| || | || || || ||||| |||||||||||||||||
Sbjct 52281 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336
>seq8251
Length=2688
Score = 107 bits (118), Expect = 2e-19
Identities = 241/356 (68%), Gaps = 7/356 (2%)
Strand=Plus/Plus
Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460
|| || || | ||| |||||| || |||||| | |||||||| || || | |||
Sbjct 242 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 298
Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520
||| || | || || ||||| | || ||||| | |||||| | ||||||||
Sbjct 299 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 358
Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578
||||| | | || |||||||| |||||||| || ||| || | || | || ||||||
Sbjct 359 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAGATGA 416
Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638
| || ||| || || || | |||||| | | | ||||||||||||
Sbjct 417 TGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATG 476
Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698
|||||||||| || ||||| ||| | ||||| || |||| || || ||| ||
Sbjct 477 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 536
Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754
| ||||| | | ||| || | || || || ||||| |||||||||||||||||
Sbjct 537 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592
>seq1814
Length=63972
Score = 107 bits (118), Expect = 2e-19
Identities = 241/356 (68%), Gaps = 7/356 (2%)
Strand=Plus/Plus
Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460
|| || || | ||| |||||| || |||||| | |||||||| || || | |||
Sbjct 1648 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 1704
Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520
||| || | || || ||||| | || ||||| | |||||| | ||||||||
Sbjct 1705 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 1764
Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578
||||| | | || |||||||| |||||||| || ||| || | || | || ||||||
Sbjct 1765 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAGATGA 1822
Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638
| || ||| || || || | |||||| | | | ||||||||||||
Sbjct 1823 TGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATG 1882
Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698
|||||||||| || ||||| ||| | ||||| || |||| || || ||| ||
Sbjct 1883 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 1942
Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754
| ||||| | | ||| || | || || || ||||| |||||||||||||||||
Sbjct 1943 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 42084168589030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |