Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq9517 113 4e-21 seq1440 113 4e-21 seq8251 107 2e-19 seq1814 107 2e-19 >seq9517 Length=2557 Score = 113 bits (124), Expect = 4e-21 Identities = 242/356 (68%), Gaps = 7/356 (2%) Strand=Plus/Plus Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460 || || || | ||| |||||| || |||||| | |||||||| || || | ||| Sbjct 567 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 623 Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520 ||| || | || || ||||| | || ||||| | |||||| | |||||||| Sbjct 624 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 683 Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578 ||||| | | || |||||||| |||||||| || |||||| | || | || |||||| Sbjct 684 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTACAACACCGTAGTCAACAAGATGA 741 Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638 | || ||| || || || | |||||| | | | |||||||||||| Sbjct 742 TGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATG 801 Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698 |||||||||| || ||||| ||| | ||||| || |||| || || ||| || Sbjct 802 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 861 Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754 | ||||| | | ||| || | || || || ||||| ||||||||||||||||| Sbjct 862 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917 >seq1440 Length=90230 Score = 113 bits (124), Expect = 4e-21 Identities = 242/356 (68%), Gaps = 7/356 (2%) Strand=Plus/Plus Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460 || || || | ||| |||||| || |||||| | |||||||| || || | ||| Sbjct 51986 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 52042 Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520 ||| || | || || ||||| | || ||||| | |||||| | |||||||| Sbjct 52043 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 52102 Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578 ||||| | | || |||||||| |||||||| || ||| || | || | || |||||| Sbjct 52103 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAGATGA 52160 Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638 | || ||| || || || | |||||| | || | |||||||||||| Sbjct 52161 TGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATG 52220 Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698 |||||||||| || ||||| ||| | ||||| || |||| || || ||| || Sbjct 52221 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 52280 Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754 | ||||| | | ||| || | || || || ||||| ||||||||||||||||| Sbjct 52281 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336 >seq8251 Length=2688 Score = 107 bits (118), Expect = 2e-19 Identities = 241/356 (68%), Gaps = 7/356 (2%) Strand=Plus/Plus Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460 || || || | ||| |||||| || |||||| | |||||||| || || | ||| Sbjct 242 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 298 Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520 ||| || | || || ||||| | || ||||| | |||||| | |||||||| Sbjct 299 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 358 Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578 ||||| | | || |||||||| |||||||| || ||| || | || | || |||||| Sbjct 359 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAGATGA 416 Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638 | || ||| || || || | |||||| | | | |||||||||||| Sbjct 417 TGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATG 476 Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698 |||||||||| || ||||| ||| | ||||| || |||| || || ||| || Sbjct 477 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 536 Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754 | ||||| | | ||| || | || || || ||||| ||||||||||||||||| Sbjct 537 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592 >seq1814 Length=63972 Score = 107 bits (118), Expect = 2e-19 Identities = 241/356 (68%), Gaps = 7/356 (2%) Strand=Plus/Plus Query 8401 ATTGGACTAAAAGCTAAAGAAAGAGAAATGAAACGGATTGGAAGATTCTTCTCTTTAATG 8460 || || || | ||| |||||| || |||||| | |||||||| || || | ||| Sbjct 1648 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 1704 Query 8461 TCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAGTACCTTATTAAGGAATATTTTGTT 8520 ||| || | || || ||||| | || ||||| | |||||| | |||||||| Sbjct 1705 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 1764 Query 8521 CCTCTAT-TCCATGGATTAACTATGGCTGATGATCTACAAT-CTGTTATAAAGAAGATGT 8578 ||||| | | || |||||||| |||||||| || ||| || | || | || |||||| Sbjct 1765 CCTCTCTGTACA-GGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAAGATGA 1822 Query 8579 TAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAGTATGTTTCAATAGCAAATCATA 8638 | || ||| || || || | |||||| | | | |||||||||||| Sbjct 1823 TGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATG 1882 Query 8639 TTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAATCAAATTATTATGTTTTCAAAG 8698 |||||||||| || ||||| ||| | ||||| || |||| || || ||| || Sbjct 1883 TTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAG 1942 Query 8699 TAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACACGAACACATGAATTCTTT 8754 | ||||| | | ||| || | || || || ||||| ||||||||||||||||| Sbjct 1943 TCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42084168589030