Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_013955.1 Length=15764 Score E Sequences producing significant alignments: (Bits) Value seq1440 98.7 1e-16 seq9517 95.1 1e-15 seq8251 95.1 1e-15 seq1814 95.1 1e-15 >seq1440 Length=90230 Score = 98.7 bits (108), Expect = 1e-16 Identities = 182/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 11218 ATTGCCAATCATTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCAAATTGC 11277 || || |||||| |||||||||| || ||||| ||| |||||||| || |||| Sbjct 52208 ATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGAT 52267 Query 11278 CATGTGTTTAAAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGTACACAT 11337 | || || ||||||||| | || |||||| ||||| ||| |||| | | |||||| Sbjct 52268 CCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACAT 52327 Query 11338 GAATTCTTTGAGAAAAGCTTGATCTATTATGCCAATAGACCAGATTTGATGATGGTTCAA 11397 ||||||||| | | || ||||||| || |||||||||| ||| | | || Sbjct 52328 GAATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATGGTTATAGAA 52387 Query 11398 GGAGATTCTCTCATTAATAGAACAGAGCATATGGTATGCTGGGAAGGTCAAAAAGGAGGA 11457 ||||| | ||| ||| || ||| | | | || || ||| |||| ||| || || Sbjct 52388 GGAGACAGTATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGT 52447 Query 11458 TTAGAAGGCCTTAGACAAAAGGGATGG 11484 | |||||| | | || || || ||| Sbjct 52448 TGCGAAGGCTTACGTCAGAAAGGTTGG 52474 >seq9517 Length=2557 Score = 95.1 bits (104), Expect = 1e-15 Identities = 181/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 11218 ATTGCCAATCATTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCAAATTGC 11277 || || |||||| |||||||||| || ||||| ||| |||||||| || |||| Sbjct 789 ATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGAT 848 Query 11278 CATGTGTTTAAAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGTACACAT 11337 | || || ||||||||| | || |||||| ||||| ||| |||| | | |||||| Sbjct 849 CCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACAT 908 Query 11338 GAATTCTTTGAGAAAAGCTTGATCTATTATGCCAATAGACCAGATTTGATGATGGTTCAA 11397 ||||||||| | | || ||||||| || |||||||||| || | | || Sbjct 909 GAATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATAGTTATAGAA 968 Query 11398 GGAGATTCTCTCATTAATAGAACAGAGCATATGGTATGCTGGGAAGGTCAAAAAGGAGGA 11457 ||||| | ||| ||| || ||| | | | || || ||| |||| ||| || || Sbjct 969 GGAGACAGTATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGT 1028 Query 11458 TTAGAAGGCCTTAGACAAAAGGGATGG 11484 | |||||| | | || || || ||| Sbjct 1029 TGCGAAGGCTTACGTCAGAAAGGTTGG 1055 >seq8251 Length=2688 Score = 95.1 bits (104), Expect = 1e-15 Identities = 181/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 11218 ATTGCCAATCATTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCAAATTGC 11277 || || |||||| |||||||||| || ||||| ||| |||||||| || |||| Sbjct 464 ATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGAT 523 Query 11278 CATGTGTTTAAAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGTACACAT 11337 | || || ||||||||| | || |||||| ||||| ||| |||| | | |||||| Sbjct 524 CCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACAT 583 Query 11338 GAATTCTTTGAGAAAAGCTTGATCTATTATGCCAATAGACCAGATTTGATGATGGTTCAA 11397 ||||||||| | | || ||||||| || |||||||||| || | | || Sbjct 584 GAATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATAGTTATAGAA 643 Query 11398 GGAGATTCTCTCATTAATAGAACAGAGCATATGGTATGCTGGGAAGGTCAAAAAGGAGGA 11457 ||||| | ||| ||| || ||| | | | || || ||| |||| ||| || || Sbjct 644 GGAGACAGTATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGT 703 Query 11458 TTAGAAGGCCTTAGACAAAAGGGATGG 11484 | |||||| | | || || || ||| Sbjct 704 TGCGAAGGCTTACGTCAGAAAGGTTGG 730 >seq1814 Length=63972 Score = 95.1 bits (104), Expect = 1e-15 Identities = 181/267 (68%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 11218 ATTGCCAATCATTTTGATTATGAAAAATGGAATAATCATCAAAGATATGCTTCAAATTGC 11277 || || |||||| |||||||||| || ||||| ||| |||||||| || |||| Sbjct 1870 ATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGAT 1929 Query 11278 CATGTGTTTAAAGTCATGGGACAATGTTTTGGTTTACCCAATCTGTTCCTGCGTACACAT 11337 | || || ||||||||| | || |||||| ||||| ||| |||| | | |||||| Sbjct 1930 CCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACAT 1989 Query 11338 GAATTCTTTGAGAAAAGCTTGATCTATTATGCCAATAGACCAGATTTGATGATGGTTCAA 11397 ||||||||| | | || ||||||| || |||||||||| || | | || Sbjct 1990 GAATTCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATAGTTATAGAA 2049 Query 11398 GGAGATTCTCTCATTAATAGAACAGAGCATATGGTATGCTGGGAAGGTCAAAAAGGAGGA 11457 ||||| | ||| ||| || ||| | | | || || ||| |||| ||| || || Sbjct 2050 GGAGACAGTATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGT 2109 Query 11458 TTAGAAGGCCTTAGACAAAAGGGATGG 11484 | |||||| | | || || || ||| Sbjct 2110 TGCGAAGGCTTACGTCAGAAAGGTTGG 2136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50296961729590