Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_017685.1
Length=14717
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 159 3e-35
seq9517 156 4e-34
seq8251 156 4e-34
seq1814 156 4e-34
seq2296 113 4e-21
>seq1440
Length=90230
Score = 159 bits (176), Expect = 3e-35
Identities = 205/280 (73%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 9919 GATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGGA 9978
||||| ||||| |||||||||||| |||| || || | | |||||| | | | ||||
Sbjct 52058 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 52117
Query 9979 TTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAAAGGA 10038
|||||||||||||| ||| | || || || ||||| || ||| | ||| || |||
Sbjct 52118 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 52177
Query 10039 CAGGGC-CTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGTG 10097
||| | || | | ||| | ||| | || || || |||||| | ||||||||||||||
Sbjct 52178 CAGACCACTCACAG-TTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTG 52236
Query 10098 GAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGTCAATTTTT 10157
||| || ||||||||| ||| |||| || || ||| ||||||||||| ||||||
Sbjct 52237 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 52296
Query 10158 GGGCTTACCTAATTTAATAGAAAGAACTCATGAGTTTTTT 10197
|| ||||||||||| | ||||| ||||| || |||
Sbjct 52297 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336
>seq9517
Length=2557
Score = 156 bits (172), Expect = 4e-34
Identities = 204/280 (73%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 9919 GATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGGA 9978
||||| ||||| |||||||||||| |||| || || | | |||||| | | | ||||
Sbjct 639 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 698
Query 9979 TTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAAAGGA 10038
|||||||||||||| ||| | || || || ||||| || ||| | ||| || |||
Sbjct 699 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 758
Query 10039 CAGGGC-CTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGTG 10097
||| | || | | ||| | ||| || || || |||||| | ||||||||||||||
Sbjct 759 CAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 817
Query 10098 GAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGTCAATTTTT 10157
||| || ||||||||| ||| |||| || || ||| ||||||||||| ||||||
Sbjct 818 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 877
Query 10158 GGGCTTACCTAATTTAATAGAAAGAACTCATGAGTTTTTT 10197
|| ||||||||||| | ||||| ||||| || |||
Sbjct 878 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917
>seq8251
Length=2688
Score = 156 bits (172), Expect = 4e-34
Identities = 204/280 (73%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 9919 GATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGGA 9978
||||| ||||| |||||||||||| |||| || || | | |||||| | | | ||||
Sbjct 314 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 373
Query 9979 TTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAAAGGA 10038
|||||||||||||| ||| | || || || ||||| || ||| | ||| || |||
Sbjct 374 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 433
Query 10039 CAGGGC-CTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGTG 10097
||| | || | | ||| | ||| || || || |||||| | ||||||||||||||
Sbjct 434 CAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 492
Query 10098 GAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGTCAATTTTT 10157
||| || ||||||||| ||| |||| || || ||| ||||||||||| ||||||
Sbjct 493 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 552
Query 10158 GGGCTTACCTAATTTAATAGAAAGAACTCATGAGTTTTTT 10197
|| ||||||||||| | ||||| ||||| || |||
Sbjct 553 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592
>seq1814
Length=63972
Score = 156 bits (172), Expect = 4e-34
Identities = 204/280 (73%), Gaps = 2/280 (1%)
Strand=Plus/Plus
Query 9919 GATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGGA 9978
||||| ||||| |||||||||||| |||| || || | | |||||| | | | ||||
Sbjct 1720 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1779
Query 9979 TTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAAAGGA 10038
|||||||||||||| ||| | || || || ||||| || ||| | ||| || |||
Sbjct 1780 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1839
Query 10039 CAGGGC-CTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGTG 10097
||| | || | | ||| | ||| || || || |||||| | ||||||||||||||
Sbjct 1840 CAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1898
Query 10098 GAATAACTATCAAAGAAAAGAGTCCAATGGCCCTGTGTTCCGAGTCATGGGTCAATTTTT 10157
||| || ||||||||| ||| |||| || || ||| ||||||||||| ||||||
Sbjct 1899 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 1958
Query 10158 GGGCTTACCTAATTTAATAGAAAGAACTCATGAGTTTTTT 10197
|| ||||||||||| | ||||| ||||| || |||
Sbjct 1959 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998
>seq2296
Length=40579
Score = 113 bits (124), Expect = 4e-21
Identities = 144/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 9919 GATTATTTTGTTATAACGGAGTATCTGATaaaaaaaTACTATGTTCCATTATTCAAAGGA 9978
||||| ||||| |||||||||||| |||| || || | | |||||| | | | ||||
Sbjct 1783 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1842
Query 9979 TTAACAATGGCTGATGACCAAAATACTGTTGTCaaaaaaaTGTTAAAAGTATCTAAAGGA 10038
|||||||||||||| ||| | || || || ||||| || ||| | ||| || |||
Sbjct 1843 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1902
Query 10039 CAGGGC-CTGATTGATTACAAAGAGATTACGATCGCTAATCATTTGGATTATGAGAAGTG 10097
||| | || | | ||| | ||| || || || |||||| | ||||||||||||||
Sbjct 1903 CAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1961
Query 10098 GAATAACTATCAAAGA 10113
||| || |||||||||
Sbjct 1962 GAACAATTATCAAAGA 1977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46948521535600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |