Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_020806.1 Length=11088 Score E Sequences producing significant alignments: (Bits) Value seq1440 100 2e-17 >seq1440 Length=90230 Score = 100 bits (110), Expect = 2e-17 Identities = 218/319 (68%), Gaps = 8/319 (3%) Strand=Plus/Plus Query 6304 GGGAGATTTTTCTCACTAATGTCGTGGAAGCTGAGAGAATATTTTGTGATCACGGAATAT 6363 || |||||||| | || ||| ||| || | || || ||||| || ||||| ||| Sbjct 52022 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 52081 Query 6364 CTAATTAAGACACACTTTGTACCACTTT-TCCACGGCTTGACAATGGCAGATGACATGAC 6422 | ||||||| || ||||| || || | | || || || |||||||| || ||| || Sbjct 52082 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACA-GGATTAACAATGGCTGACGACTAGAA 52140 Query 6423 GGCTGTAATAAAGAAAATGTTGGAAAGTTCAAGTGGACAGGGT-CTAAAAGATTATTCGG 6481 | ||| | || || ||| || || |||| ||||||| || | || |||| | Sbjct 52141 CACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAG-TTATGATG 52199 Query 6482 CAGTATGCATTGCAAACCACATTGACTATGAGAAATGGAACAACCATCA--GAGGAAACG 6539 || ||| ||||| || |||| |||||||| |||||||| |||| |||| | | Sbjct 52200 AGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGG 52259 Query 6540 GTCAAATGAACCAATTTTTAAAGTCATGGGTCAATTCTTGGGGTTTCCCAACCTTATATC 6599 | |||||| || | || ||||||||||| ||| || || || || || | | | Sbjct 52260 G--AAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTAC 52317 Query 6600 GAGGACTCATGAATTCTTT 6618 ||| || |||||||||||| Sbjct 52318 GAGAACACATGAATTCTTT 52336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35346271655520