Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq8251 87.8 1e-13 seq1814 87.8 1e-13 seq1440 87.8 1e-13 seq9517 84.2 1e-12 >seq8251 Length=2688 Score = 87.8 bits (96), Expect = 1e-13 Identities = 205/304 (67%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 6022 GAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCACGGG 6081 || ||||| || ||||| |||||| | || |||| |||||||||||| | | | || Sbjct 314 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 373 Query 6082 CTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTCAGGA 6141 | || ||||| |||||| || | || | || || |||||| | | || || ||| Sbjct 374 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 433 Query 6142 CAAGGCGCCTCCGA-CTATGATGCCATTGCCATTGCGAACCATATTGACTATGAAAAATG 6200 | || | ||| || ||||||| |||| || || ||| |||| ||||| || || Sbjct 434 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 492 Query 6201 GAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCT 6260 ||| || ||||| | || |||| ||| |||||| ||||||||||| || | Sbjct 493 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 552 Query 6261 AGGGTATCCAAATTTAATTTAC-CGGACGCATGAGTTTTTTGAGAATAGCCTCATATATT 6319 || | || ||||| ||||| | || ||||| || ||| | || || | |||| Sbjct 553 TGGATTACCTAATTT-GTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATT 611 Query 6320 ACAA 6323 |||| Sbjct 612 ACAA 615 >seq1814 Length=63972 Score = 87.8 bits (96), Expect = 1e-13 Identities = 205/304 (67%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 6022 GAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCACGGG 6081 || ||||| || ||||| |||||| | || |||| |||||||||||| | | | || Sbjct 1720 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1779 Query 6082 CTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTCAGGA 6141 | || ||||| |||||| || | || | || || |||||| | | || || ||| Sbjct 1780 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1839 Query 6142 CAAGGCGCCTCCGA-CTATGATGCCATTGCCATTGCGAACCATATTGACTATGAAAAATG 6200 | || | ||| || ||||||| |||| || || ||| |||| ||||| || || Sbjct 1840 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1898 Query 6201 GAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCT 6260 ||| || ||||| | || |||| ||| |||||| ||||||||||| || | Sbjct 1899 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 1958 Query 6261 AGGGTATCCAAATTTAATTTAC-CGGACGCATGAGTTTTTTGAGAATAGCCTCATATATT 6319 || | || ||||| ||||| | || ||||| || ||| | || || | |||| Sbjct 1959 TGGATTACCTAATTT-GTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATT 2017 Query 6320 ACAA 6323 |||| Sbjct 2018 ACAA 2021 >seq1440 Length=90230 Score = 87.8 bits (96), Expect = 1e-13 Identities = 205/304 (67%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 6022 GAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCACGGG 6081 || ||||| || ||||| |||||| | || |||| |||||||||||| | | | || Sbjct 52058 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 52117 Query 6082 CTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTCAGGA 6141 | || ||||| |||||| || | || | || || |||||| | | || || ||| Sbjct 52118 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 52177 Query 6142 CAAGGCGCCTC-CGACTATGATGCCATTGCCATTGCGAACCATATTGACTATGAAAAATG 6200 | || | ||| | ||||||| | |||| || || ||| |||| ||||| || || Sbjct 52178 C-AGACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTG 52236 Query 6201 GAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCT 6260 ||| || ||||| | || |||| ||| |||||| ||||||||||| || | Sbjct 52237 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 52296 Query 6261 AGGGTATCCAAATTTAATTTAC-CGGACGCATGAGTTTTTTGAGAATAGCCTCATATATT 6319 || | || ||||| ||||| | || ||||| || ||| | || || | |||| Sbjct 52297 TGGATTACCTAATTT-GTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATT 52355 Query 6320 ACAA 6323 |||| Sbjct 52356 ACAA 52359 >seq9517 Length=2557 Score = 84.2 bits (92), Expect = 1e-12 Identities = 204/304 (67%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 6022 GAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCACGGG 6081 || ||||| || ||||| |||||| | || |||| |||||||||||| | | | || Sbjct 639 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 698 Query 6082 CTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTCAGGA 6141 | || ||||| |||||| | | || | || || |||||| | | || || ||| Sbjct 699 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 758 Query 6142 CAAGGCGCCTCCGA-CTATGATGCCATTGCCATTGCGAACCATATTGACTATGAAAAATG 6200 | || | ||| || ||||||| |||| || || ||| |||| ||||| || || Sbjct 759 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 817 Query 6201 GAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTTCCT 6260 ||| || ||||| | || |||| ||| |||||| ||||||||||| || | Sbjct 818 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 877 Query 6261 AGGGTATCCAAATTTAATTTAC-CGGACGCATGAGTTTTTTGAGAATAGCCTCATATATT 6319 || | || ||||| ||||| | || ||||| || ||| | || || | |||| Sbjct 878 TGGATTACCTAATTT-GTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTATT 936 Query 6320 ACAA 6323 |||| Sbjct 937 ACAA 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34079792866560